Author

P. Swain

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biophysics· 3 Plant Biology· 3 Biochemistry· 1

Signature Assays, Organisms & Methods

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Research Focus:chromatin & epigenetic regulation· 3 Approach:experimental assay· 3 Organism:plant (other)· 3 Approach:statistical model· 3 Assay:DNA methylation· 2 Research Focus:metabolism & bioenergetics· 2 Assay:metabolomics· 2 Research Focus:cell type annotation· 1

Frequent Co-Authors

G. K. Dash· 2 shared M. J. Baig· 2 shared S. Choubey· 2 shared S. K. Sahoo· 2 shared A. Annamalai· 1 shared A. B. Ball· 1 shared A. E. Jones· 1 shared A. Guhey· 1 shared

Activity by Year

2018-2024 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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2 shared papersPlant Biology

G. K. Dash

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Author profile →

7 papers

Recent·Most cited

Role of protein-protein interactions on model chromatin organization

P. Swain, S. Choubey, S. Vemparala

This study uses a polymer-based model to show how protein-protein interactions and DNA sequence influence chromatin organization and compartmentalization.

bioRxiv · Mar 3, 2024 · PreprintBiophysics

Decoding the role of DNA sequence on protein-DNA co-condensation

R. K. Singh, P. Swain, M. Ganji, S. Choubey

This paper develops a polymer-based model to study how DNA sequence affects protein-DNA co-condensation, showing that sequence heterogeneity leads to multiple condensates.

bioRxiv · Feb 24, 2024Biophysics

Calculation of ATP production rates using the Seahorse XF Analyzer

B. R. Desousa, K. K. O. Kim, A. E. Jones, A. B. Ball, W. Y. Hsieh, P. Swain, D. H. Morrow, D. A. Ferrick, A. J. Brownstein, O. S. Shirihai, A. Neilson, D. A. Nathanson, G. W. Rogers, B. P. Dranka, A. N. Murphy, , A. S. Divakaruni

The paper develops a method to calculate ATP production rates from oxidative phosphorylation and glycolysis using Seahorse XF Analyzer data, enabling direct comparison of ATP sources in live cells.

bioRxiv · Apr 16, 2022Biochemistry

Phenological, Physiological and yield markers as efficient tools to identify drought tolerant rice genotypes in Eastern India

S. K. Sahoo, G. K. Dash, A. Guhey, M. J. Baig, M. Barik, S. Parida, P. Swain

The paper identifies drought-tolerant rice genotypes in Eastern India by analyzing phenological, physiological, and yield markers under drought and well-watered conditions.

bioRxiv · May 29, 2020 · PreprintPlant Biology

Exogenously applied ABA induced changes in physio-biochemical attributes in selected rice varieties under osmotic stress

G. K. Dash, C. K. Geda, S. K. Sahoo, M. J. Baig, P. Swain

This study examines how exogenous abscisic acid affects biochemical traits in rice under osmotic stress, revealing ABA-dependent and independent regulatory mechanisms.

bioRxiv · May 27, 2020 · PreprintPlant Biology

Identification of QTLs for high grain yield and component traits in New Plant Types of rice

R. Donde, S. Mohapatra, S. Y. Baksh, B. Padhy, M. Mukherjee, S. Roy, K. Chattopadhyay, A. Annamalai, P. Swain, K. K. Sahoo, O. N. Singh, L. Behera, S. K. Dash

The paper identifies QTLs associated with grain yield and related traits in rice using SSR markers and association analysis.

bioRxiv · Jan 7, 2020Plant Biology

Cell boundary confinement sets the size and position of the E. coli chromosome

F. Wu, P. Swain, L. Kuijpers, X. Zheng, K. Felter, M. Guurink, D. Chaudhuri, B. Mulder, C. Dekker

This study shows that spatial confinement in E. coli determines chromosome size and position, with simulations supporting depletion effects from cytosolic crowders.

bioRxiv · Jun 15, 2018Biophysics