Author

R. Jenq

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Microbiology· 3

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Organism:human· 2 Assay:metagenomics· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:clustering· 1 Approach:experimental assay· 1

Frequent Co-Authors

A. El-Naggar· 1 shared A. Futreal· 1 shared A. Kambal· 1 shared A. Olvera· 1 shared A. Rajan· 1 shared A. W. Maresso· 1 shared C. Peterson· 1 shared C.-C. Chang· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 18 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperMicrobiology

A. El-Naggar

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Intratumoral Microbiome of Adenoid Cystic Carcinomas and Comparison with other Head and Neck Cancers

T. Karpinets, Y. Mitani, C.-C. Chang, X. Wu, X. Song, I. I. Flores, L. K. McDaniel, Y. M. Hoballah, F. J. Veguilla, R. Ferrarotto, L. Colbert, N. Ajami, R. Jenq, J. Zhang, A. Futreal, A. El-Naggar

This study identifies distinct microbial subtypes in adenoid cystic carcinomas and links them to patient outcomes and tumor biology.

bioRxiv · Jan 30, 2024 · PreprintMicrobiology

Functional Genomics of Gastrointestinal Escherichia coli Isolated from Patients with Cancer and Diarrhea

H. Carter, J. Clark, L. G. Carlin, E. Vaughan, A. Rajan, A. Olvera, X. Yu, X.-L. Zeng, A. Kambal, M. Holder, X. Qin, R. A. Gibbs, J. F. Petrosino, D. M. Muzny, H. Doddapaneni, , P. C. Okhuysen

The paper investigates E. coli strains from cancer patients with diarrhea, finding novel adherence patterns and high antibiotic resistance gene carriage.

bioRxiv · May 31, 2023 · PreprintMicrobiology

Performance Determinants of Unsupervised Clustering Methods for Microbiome Data

Y. Shi, L. Zhang, C. Peterson, K.-A. Do, R. Jenq

The paper evaluates clustering methods for microbiome data, identifies scenarios where specific metrics underperform, and proposes a combined metric that improves performance across datasets.

bioRxiv · Apr 8, 2021Microbiology