Author

Ronit Nir

Weizmann Institute of Science

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 1 Genomics· 1 Molecular Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Research Focus:gene regulatory network inference· 3 Research Focus:differential expression· 2 Assay:DNA methylation· 2 Research Focus:benchmarking· 1 Assay:ChIP-seq· 1 Organism:human· 1 Assay:metagenomics· 1

Frequent Co-Authors

Schraga SchwartziD· 3 shared Jacob H. HannaiD· 2 shared Lior Lasman· 2 shared Miguel Angel García-CamposiD· 2 shared Ran ShachariD· 2 shared Ursula Toth· 2 shared Walter RossmanithiD· 2 shared Adina WeinbergeriD· 1 shared

Activity by Year

2019-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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3 shared papersSystems Biology

Schraga SchwartzORCID

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Author profile →

4 papers

Recent·Most cited

Passive shaping of intra- and intercellular m6A dynamics via mRNA metabolism

David Dierks, Ran Shachar, Ronit Nir, Miguel Angel García-Campos, Anna Uzonyi, David Wiener, Ursula Toth, Walter Rossmanith, Lior Lasman, Boris Slobodin, Jacob H. Hanna, Yaron E. Antebi, Ruth Scherz‐Shouval, Schraga Schwartz

The paper introduces a differential model m6ADyn to predict m6A dynamics by integrating mRNA metabolism and validates its predictions through experimental confirmation.

eLife · Jun 30, 2025Peer-reviewedSystems Biology

A sequence-specific RNA acetylation catalyst

Supuni Thalalla Gamage, Shereen A. Howpay Manage, Aldema Sas‐Chen, Ronit Nir, Brett W. Burkhart, Isita Jhulki, Courtney N. Link, Manini S. Penikalapati, Jane E. Jones, Lakshminarayan M. Iyer, Lakshminarayanan Aravind, Thomas J. Santangelo, Schraga Schwartz, Jordan L. Meier

This study characterizes TkNat10, an RNA acetyltransferase from T. kodakarensis, showing its role in thermotolerance and its ability to modify RNA substrates with specific sequence preferences.

Nucleic Acids Research · Mar 7, 2025Peer-reviewedBiochemistry

Deciphering the ‘m6A code’ via quantitative profiling of m6A at single-nucleotide resolution

Miguel Angel García-Campos, Sarit Edelheit, Ursula Toth, Modi Safra, Ran Shachar, Sergey V. Viukov, Roni Winkler, Ronit Nir, Lior Lasman, Alexander S. Brandis, Jacob H. Hanna, Walter Rossmanith, Schraga Schwartz

This paper introduces MASTER-seq, a method to quantitatively profile m6A sites at single-nucleotide resolution, revealing a predictable code that determines m6A stoichiometry and dynamics.

Cell · Jun 27, 2019Peer-reviewedMolecular Biology

Deciphering Transcriptional Regulation of Human Core Promoters

Shira Weingarten-Gabbay, Ronit Nir, Shai Lubliner, Eilon Sharon, Yael Kalma, Adina Weinberger, Eran Segal

The paper systematically assays core promoter elements to understand their role in transcriptional regulation and identifies key sequence features and spatial organization principles.

Genome Research · Feb 1, 2019Peer-reviewedGenomics