Author

S H Kim

The University of Texas at Austin

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 2 Biophysics· 1

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 2 Approach:deep learning· 2 Approach:statistical model· 2 Assay:DNA methylation· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:imaging· 1 Assay:long-read sequencing· 1

Frequent Co-Authors

Anh-Thu Nguyen· 3 shared Hsin‐Chih YehiD· 3 shared Yu-An Kuo· 3 shared Yujie HeiD· 3 shared Chengde MaoiD· 2 shared Emile J. Batchelder-SchwabiD· 2 shared Naseem Siraj· 2 shared Pengyu Y. ReniD· 2 shared

Activity by Year

2026-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersBioengineering

Anh-Thu Nguyen

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

A Chemigenetic Fluorescence Lifetime Biosensor for Dopamine Sensing

Anh-Thu Nguyen, Hieu Tran, Limin Chen, Abby Criswell, Susanna Bradbury, Yui Zhu, Yujie He, S H Kim, Yuan-I Chen, Trung Duc Nguyen, Soonwoo Hong, Yu-An Kuo, Saeed Seifi, Wei-Ru Chen, Stephanie K. Seidlits, , Hsin‐Chih Yeh

This paper introduces dHaloLife635, a chemigenetic fluorescence lifetime sensor for dopamine that shows selectivity and stability in live cells.

bioRxiv · Oct 30, 2026 · PreprintBioengineering

Fluorogenic Aptamer Optimizations on a Massively Parallel Sequencing Platform

Yu-An Kuo, Y.-I. Chen, Naseem Siraj, Yujie He, Zhenglin Yang, Yanxing Wang, Emile J. Batchelder-Schwab, Zeynep Korkmaz, Siem Yonas, Trung D. Nguyen, Soonwoo Hong, Anh-Thu Nguyen, S H Kim, Saeed Seifi, Po‐Hsun Fan, , Hsin‐Chih Yeh

This paper optimizes a DNA-based fluorogenic aptamer (D-FAP) using a screening-and-simulation pipeline on a repurposed sequencing platform, achieving improved fluorescence properties.

ACS Sensors · May 11, 2026Peer-reviewedBiophysics

Lifetime-based multiplexed detection of viral RNA using fluorogenic aptamers

Y R Chen, Yu-An Kuo, Yujie He, Naseem Siraj, Emile J. Batchelder-Schwab, Yin-Jui Chang, Siem Yonas, Yuting Wu, Zhenglin Yang, Anh-Thu Nguyen, S H Kim, Yi Lu, Chengde Mao, Pengyu Y. Ren, Hsin‐Chih Yeh

This paper introduces a fluorescence-lifetime-based multiplexed detection strategy using fluorogenic aptamers to distinguish viral RNA targets with minimal cross-reactivity and spectral overlap.

bioRxiv · Apr 15, 2026 · PreprintBioengineering