Author

S. Blasche

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 4

Signature Assays, Organisms & Methods

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Assay:metagenomics· 4 Organism:human· 3 Research Focus:ecology & biodiversity· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Research Focus:cell type annotation· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1

Frequent Co-Authors

K. R. Patil· 4 shared A. Telzerow· 2 shared A. Typas· 2 shared L. Kalmar· 2 shared P. Bork· 2 shared R. Guan· 2 shared V. Benes· 2 shared Y. Kim· 2 shared

Activity by Year

2019-2024 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 34 mutual co-author links

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4 shared papersMicrobiology

K. R. Patil

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4 papers

Recent·Most cited

Emergent survival and extinction of species within gut bacterial communities

N. I. van den Berg, M. Tramontano, R. Guan, S. Andrejev, S. Blasche, Y. Kim, M. Klunemann, A. R. Gontao Brochado, L. Kalmar, A. Telzerow, P. Bork, D. Sevin, A. Typas, K. R. Patil

The paper shows how species in gut bacterial communities can survive or go extinct based on resource availability and metabolic interactions, identifying emergent survival and community-driven extinctions.

bioRxiv · Apr 29, 2024 · PreprintMicrobiology

Gut microbiome remains stable following COVID-19 vaccination in healthy and immuno-compromised individuals

R. H. Boston, R. Guan, L. Kalmar, S. Beier, E. C. Horner, N. Beristain-Covarrubias, J. C. Yam-Puc, P. P. Gerber, L. Faria, A. Kuroshchenkova, A. E. Lindell, S. Blasche, A. Correa-Noguera, A. Elmer, C. Saunders, , K. R. Patil

This study shows that the gut microbiome remains stable after COVID-19 vaccination in both healthy and immuno-compromised individuals, with no significant changes in diversity, phylum, species, or functional capacity.

bioRxiv · Aug 23, 2023Microbiology

Consistency across multi-omics layers in a drug-perturbed gut microbial community

S. Wuyts, R. Alves, M. Zimmermann-Kogadeeva, S. Nishijima, S. Blasche, M. Driessen, P. E. Geyer, R. Hercog, E. Kartal, L. Maier, J. B. Müller, S. Garcia Santamarina, T. S. B. Schmidt, D. C. Sevin, A. Telzerow, , P. Bork

The paper examines consistency and complementarity across five omics layers in a drug-perturbed gut microbial community, finding high agreement in species abundance and functional insights from different data types.

bioRxiv · Jan 3, 2023Microbiology

Emergence of stable coexistence in a complex microbial community through metabolic cooperation and spatio-temporal niche partitioning

S. Blasche, Y. Kim, R. Mars, E. Kafkia, M. Maansson, D. Machado, B. Teusink, J. Nielsen, V. Benes, R. Neves, U. Sauer, K. R. Patil

This study shows how kefir, a natural microbial community, achieves stable coexistence through spatio-temporal niche partitioning and metabolic cooperation during milk fermentation.

bioRxiv · Feb 22, 2019 · PreprintMicrobiology