Author

T. K. Hsiai

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 3 Biophysics· 1 Physiology· 1

Signature Assays, Organisms & Methods

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Assay:imaging· 4 Organism:mouse· 4 Research Focus:cell type annotation· 3 Approach:deep learning· 2 Research Focus:differential expression· 2 Approach:experimental assay· 2 Organism:C. elegans· 1 Research Focus:clustering· 1

Frequent Co-Authors

K. I. Baek· 3 shared M. Roustaei· 3 shared Y. Ding· 3 shared C.-C. Chang· 2 shared P. Abiri· 2 shared V. Gudapati· 2 shared A. Chu· 1 shared A. M. Blazquez-Medela· 1 shared

Activity by Year

2019-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 26 mutual co-author links

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3 shared papersBioengineering

K. I. Baek

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Author profile →

5 papers

Recent·Most cited

Exercise Mitigates Flow Recirculation and Activates Mechanosensitive Transcriptome to Uncover Endothelial SCD1-Catalyzed Anti-Inflammatory Metabolites

S. Cavallero, M. Roustaei, S. Satta, J. M. Cho, H. Phan, K. I. Baek, A. M. Blazquez-Medela, S. Gonzalez-Ramos, K. Vu, S.-K. Park, T. Yokota, J. A. Sumner, J. Mack, C. D. Sigmund, S. Reddy, , T. K. Hsiai

This study shows exercise reduces flow recirculation and activates SCD1 to produce anti-inflammatory metabolites in endothelial cells.

bioRxiv · May 2, 2023 · PreprintPhysiology

View-channel-depth light-field microscopy: real-time volumetric reconstruction of biological dynamics by deep learning

Z. Wang, L. Zhu, H. Zhang, G. Li, Y. Li, Y. Yang, Y. Ding, S. Gao, T. K. Hsiai, P. Fei, M. Zhen, C. Yi

This paper introduces a deep learning method to improve light-field microscopy, enabling high-speed, artifact-free volumetric imaging of biological processes.

Nature Methods · Feb 11, 2021Peer-reviewedBiophysics

Three-Dimensional Impedance Tomographic Mapping of Metabolically Active Endolumen

P. Abiri, Y. Luo, Z.-Y. Huang, M. Roustaei, S. Duarte-Vogel, Q. Cui, R. R. S. Packard, R. Ebrahimi, P. Benharash, Y.-C. Tai, T. K. Hsiai

This work demonstrates in vivo mapping of oxidized LDL-laden endolumen using an intravascular dual-sensor in a swine model of atherosclerosis.

bioRxiv · Sep 24, 2020 · PreprintBioengineering

Selective Plane Illumination Microscopy and Computing Reveal Differential Obliteration of Retinal Vascular Plexuses

C.-C. Chang, A. Chu, S. Meyer, M. M. Sun, P. Abiri, K. I. Baek, V. Gudapati, X. Ding, P. Guihard, Y. Ding, K. I. Bostrom, S. Li, L. K. Gordon, J. J. Zheng, T. K. Hsiai

The paper uses 3-D imaging and computational analysis to show preferential obliteration of retinal secondary plexuses in hyperoxia-induced retinopathy.

bioRxiv · May 6, 2020Bioengineering

Saak Transform-Based Machine Learning for Light-Sheet Imaging of Cardiac Trabeculation

Y. Ding, V. Gudapati, R. Lin, Y. Fei, S. Song, C.-C. Chang, K. I. Baek, Z. Wang, M. Roustaei, D. Kuang, C.- C. J. Kuo, T. K. Hsiai

This paper develops a Saak transform-based machine learning framework for efficient segmentation and quantification of cardiac trabeculation in light-sheet images after chemotherapy.

bioRxiv · Oct 4, 2019Bioengineering