Author

V. K. Nguyen

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cancer Biology· 1 Microbiology· 1 Pharmacology & Toxicology· 1 Scientific Communication & Education· 1

Signature Assays, Organisms & Methods

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Assay:bulk RNA-seq· 3 Organism:human· 3 Research Focus:cell type annotation· 2 Research Focus:differential expression· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:database / resource· 1 Approach:experimental assay· 1

Frequent Co-Authors

A. C. Drotos· 1 shared A. Fox· 1 shared A. Kahana· 1 shared A. Kriebel· 1 shared A. Tapaswi· 1 shared A. Woloshin· 1 shared A. X. Han· 1 shared B. N. Wolford· 1 shared

Activity by Year

2021-2022 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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1 shared paperScientific Communication & Education

A. C. Drotos

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

High Throughput Transcriptomics to Understand Chemical Drivers of Aggressive Breast Cancer Subtypes

K. E. Sala-Hamrick, A. Tapaswi, K. M. Polemi, V. K. Nguyen, J. A. Colacino

This study uses high throughput transcriptomics to analyze how 21 chemicals affect gene expression in breast cells, finding dose-dependent changes linked to breast cancer pathways.

bioRxiv · Nov 16, 2022 · PreprintCancer Biology

Teaching Python for Data Science: Collaborative development of a modular & interactive curriculum

M. Duda, K. L. Sovacool, N. Farzaneh, V. K. Nguyen, S. E. Haynes, H. Falk, K. L. Furman, L. A. Walker, R. Diao, M. Oneka, A. C. Drotos, A. Woloshin, G. A. Dotson, A. Kriebel, L. Meng, , B. N. Wolford

The paper describes the development of an open-source, modular Python data science curriculum for high school women using Jupyter notebooks and collaborative practices.

bioRxiv · Jun 17, 2021Scientific Communication & Education

Within-host evolutionary dynamics of seasonal and pandemic human influenza A viruses in young children

A. X. Han, Z. C. Felix Garza, M. R. A. Welkers, R. M. Vigeveno, N. D. Tran, T. Q. M. Le, Q. T. Pham, D. T. Dang, T. N. A. Tran, M. T. Ha, T. H. Nguyen, Q. T. Le, T. H. Le, T. B. N. Hoang, K. Chokephaibulkit, , C. A. Russell

This study examines within-host evolutionary dynamics of seasonal and pandemic influenza A viruses in young children, finding that nonsynonymous mutations decrease over time in A/H1N1pdm09 but increase in A/H3N2 due to mutation-selection balance.

bioRxiv · Mar 20, 2021Microbiology

Identifying the Link Between Chemical Exposures and Breast Cancer in African American Women via ToxCast High Throughput Screening Data

K. Polemi, V. K. Nguyen, J. Heidt, A. Kahana, O. Jolliet, J. Colacino

This study identifies chemicals with breast cancer-related biological activity that are disproportionately exposed in African American women using ToxCast data and biomonitoring.

bioRxiv · Jan 22, 2021Pharmacology & Toxicology