Author

Victor Ruotti

University of Wisconsin–Madison

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:deconvolution· 1 Research Focus:eQTL / molecular QTL mapping· 1 Approach:experimental assay· 1 Organism:human· 1 Assay:metagenomics· 1 Organism:mouse· 1

Frequent Co-Authors

Alan AttieiD· 1 shared Alaya Mikalauskas· 1 shared Asako Tan· 1 shared Brian S. YandelliD· 1 shared Brice Le FrançoisiD· 1 shared C. Opara· 1 shared Christopher H. EmfingeriD· 1 shared Daryl M. GohliD· 1 shared

Activity by Year

2023-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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1 shared paperGenetics

Alan AttieORCID

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2 papers

Recent·Most cited

Distinct genetic architectures of mRNA expression and splicing QTL in the Diversity Outbred mouse population

C. Opara, Kelly A. Mitok, Christopher H. Emfinger, Katheryn L Schueler, Donnie S. Stapleton, Nancy A. Benkusky, Udaya Keerthy Gadiparthi, Kalynn Willis, Victor Ruotti, Brian S. Yandell, Mark P. Keller, Alan Attie

The paper maps eQTL, isoQTL, irQTL, and sQTL in DO mice, showing distinct genetic effects on mRNA expression and splicing, and identifies candidate genes and regulatory mechanisms.

bioRxiv · Sep 15, 2026 · PreprintGenetics

Rational probe design for efficient rRNA depletion and improved metatranscriptomic analysis of human microbiomes

Asako Tan, Senthil K. Murugapiran, Alaya Mikalauskas, Jeff Koble, Drew Kennedy, Fred W. Hyde, Victor Ruotti, Emily Law, Jordan Jensen, Gary P. Schroth, Jean M. Macklaim, Scott Kuersten, Brice Le François, Daryl M. Gohl

The paper introduces a probe set for efficient rRNA depletion in human microbiome samples, improving metatranscriptomic analysis and reducing quantitative error.

BMC Microbiology · Oct 20, 2023Peer-reviewedGenomics