Author

Yuxuan Wang

University of Cambridge

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

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Biology Disciplines

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Bioinformatics· 1 Biophysics· 1 Developmental Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Approach:statistical model· 3 Research Focus:gene regulatory network inference· 2 Research Focus:cell signaling & trafficking· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Organism:mouse· 1 Assay:scRNA-seq· 1 Assay:spatial transcriptomics· 1

Frequent Co-Authors

Benjamin SteventoniD· 2 shared Berta VerdiD· 2 shared Brooks PaigeiD· 2 shared Kay SpiessiD· 2 shared Seongwon HwangiD· 2 shared Timothy FultoniD· 2 shared Bethan ClarkiD· 1 shared Chen PengiD· 1 shared

Activity by Year

2021-2026 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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2 shared papersSystems Biology

Benjamin SteventonORCID

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Author profile →

4 papers

Recent·Most cited

Generative Access to Make-on-Demand Chemical Space Enables Ultra-Large Virtual Screening

Kaiyue Zhang, Ying Sun, Xinyue Li, Yuxuan Wang, Chen Peng, Xin Jin, Qi Hu, Jing Huang

The paper introduces REAL-SWIT, a generative framework for ultra-large virtual screening that efficiently explores chemical space by generating molecules with favorable docking scores.

bioRxiv · Sep 23, 2026 · PreprintBioinformatics

Sloppiness and Action Constraint in Cell State Transitions: Are Single Cells Sloppy?

Yuxuan Wang, Junda Ying, He Xiao, M W Huang, Lei Zhang, Weikang Wang

The paper analyzes single-cell dynamics during state transitions, finding that cell states are sensitive to few 'stiff' parameters and robust to many 'sloppy' parameters, suggesting a principle of least action.

bioRxiv · Feb 22, 2026 · PreprintBiophysics

Approximated Gene Expression Trajectories (AGETs) for Gene Regulatory Network Inference on Cell Tracks

Kay Spiess, Shannon E. Taylor, Timothy Fulton, Kane Toh, Dillan Saunders, Seongwon Hwang, Yuxuan Wang, Brooks Paige, Benjamin Steventon, Berta Verd

This paper introduces a framework to infer gene regulatory networks (GRNs) during tissue morphogenesis by integrating cell movement and gene expression data.

iScience · Aug 30, 2024Peer-reviewedSystems Biology

Cell Rearrangement Generates Pattern Emergence as a Function of Temporal Morphogen Exposure.

Timothy Fulton, Kay Spiess, Lewis Thomson, Yuxuan Wang, Bethan Clark, Seongwon Hwang, Brooks Paige, Berta Verd, Benjamin Steventon

The paper shows cell rearrangement during mesoderm elongation generates gene expression patterns through temporal Wnt and FGF exposure.

bioRxiv · Feb 5, 2021 · PreprintDevelopmental Biology