Author

Sandra E. Spencer Miko

BC Cancer AgencyORCID 0000-0001-6446-1584Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Biochemistry· 2 Bioinformatics· 1 Cancer Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Assay:proteomics· 3 Approach:statistical model· 3 Research Focus:benchmarking· 2 Research Focus:database / resource· 2 Research Focus:differential expression· 2 Organism:human· 2 Research Focus:software / tool· 2

Frequent Co-Authors

Deanna L. PlubelliD· 2 shared Eric L. HuangiD· 2 shared Gregg B. MoriniD· 2 shared Michael J. MacCossiD· 2 shared Alex MirandaiD· 1 shared Allyson C. BanvilleiD· 1 shared Andrew N. HoofnagleiD· 1 shared Brad H. NelsoniD· 1 shared

Activity by Year

2018-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersBiochemistry

Deanna L. PlubellORCID

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Author profile →

4 papers

Recent·Most cited

Cancer BiologybioRxivPreprintMay 12, 2025

Prognostically favorable immune responses to ovarian cancer are distinguished by self-reactive intra-epithelial plasma cells

Allyson C. Banville, Céline M. Laumont, Karanvir Singh…·Brad H. Nelson

The paper identifies self-reactive intra-epithelial plasma cells in ovarian cancer that correlate with improved prognosis and suggest a mechanism for immune response against tumor heterogeneity.

1 citation

humanscRNA-seq

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BiochemistryJournal of Proteome ResearchPeer-reviewedMay 6, 2025

Data Independent Acquisition to Inform the Development of Targeted Proteomics Assays Using a Triple Quadrupole Mass Spectrometer

Deanna L. Plubell, Eric L. Huang, Sandra E. Spencer Miko…·Michael J. MacCoss

The paper demonstrates using data-independent acquisition (DIA) to select peptides for targeted proteomics assays, achieving comparable quantitative precision to existing methods.

6 citations

humanproteomics

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BiochemistryJournal of Proteome ResearchPeer-reviewedSep 9, 2024

A framework for quality control in quantitative proteomics

Kristine A. Tsantilas, Gennifer E. Merrihew, Julia E. Robbins…·Michael J. MacCoss

The paper introduces a framework for quality control in quantitative proteomics, combining internal and external QC measures with tools for data analysis and deposition.

48 citationstop 2%

proteomicsexperimental assay

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BioinformaticsJournal of Proteome ResearchPeer-reviewedNov 21, 2018

RawTools: Rapid and Dynamic Interrogation of Orbitrap Data Files for Mass Spectrometer System Management

Kevin A. Kovalchik, Shane Colborne, Sandra E. Spencer Miko…·Christopher S. Hughes

RawTools extracts and analyzes data from Thermo Orbitrap raw files to aid in mass spectrometer system management and performance optimization.

26 citations

proteomicsexperimental assay

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