Genome-wide association meta-analysis identifies novel GP2 gene risk variants for pancreatic cancer in the Japanese population
Yingsong Lin, Masahiro Nakatochi, Yasuyuki Hosono…·Keitaro Matsuo
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RIKEN Center for Integrative Medical SciencesORCID 0000-0001-8748-5597Unclaimed ORCID profile · follow to get notified of new preprints
50 papers
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Yingsong Lin, Masahiro Nakatochi, Yasuyuki Hosono…·Keitaro Matsuo
Kazuyoshi Ishigaki, Masato Akiyama, Masahiro Kanai…·Yoichiro Kamatani
A large-scale GWAS in 212,453 Japanese individuals identified 45 novel susceptibility loci for 22 diseases, highlighting the importance of non-European population studies.
Hiroshi Matsunaga, Kaoru Ito, Masato Akiyama…·Issei Komuro
This study identifies three new CAD loci through transethnic GWAS and highlights population-specific genetic differences between Japanese and European populations.
Cassandra Nichole Spracklen, Momoko Horikoshi, Young Jin Kim…·Kyong Soo Park
This paper identifies 56 new type 2 diabetes loci in 433,540 East Asian individuals through a meta-analysis of GWAS data.
Masaru Koido, Chung-Chau Hon, Satoshi Koyama…·Chikashi C. Terao
The paper develops MENTR, a machine learning framework to predict cell-type-specific ncRNA transcription from genome sequence, identifying causal variants and ncRNAs associated with complex traits.
FinnGen, Saori Sakaue, Masahiro Kanai…·Yukinori Okada
This study uses polygenic risk scores from three biobanks to show that genetic susceptibility to traits like high blood pressure and obesity is associated with shorter lifespan.
Masashi Fujita, Xiaoxi Liu, Yusuke Iwasaki…·Yukihide Momozawa
The paper screens 12,503 Japanese CRC patients and 23,705 controls for germline variants in 27 cancer genes, finding 3.3% of patients have pathogenic variants linked to CRC risk.
Max Lam, Chia‐Yen Chen, Zhiqiang Li…·Hailiang Huang
This study identifies schizophrenia genetic associations in East Asian and European populations, finding similar genetic effects across ancestries but highlighting challenges in polygenic risk prediction across groups.
Satoshi Koyama, Kaoru Ito, Chikashi C. Terao…·Issei Komuro
This study identifies novel genetic loci for coronary artery disease in Japanese and transethnic populations and develops a polygenic risk score that outperforms population-specific scores.
Sarah Howles, Akira Wiberg, Michelle E. Goldsworthy…·Dominic Furniss
This study identifies 20 genetic loci associated with kidney stone disease, including novel variants in CYP24A1 and DGKD, which influence vitamin D metabolism and calcium-sensing receptor signaling.
Minhui Chen, Carlo Sidore, Masato Akiyama…·Charleston W. K. Chiang
The paper re-examines polygenic adaptation at height-associated loci in Sardinians and mainland Europeans using UKB and BBJ data, finding evidence of adaptation in Sardinians and a subtle signal in mainland Europeans.
Luke Anderson-Trocmé, Rick Farouni, Mathieu Bourgey…·Simon Gravel
The paper identifies a batch effect in 1000 Genomes Project data causing spurious mutation calls and affecting GWAS results, suggesting legacy data may need to be retired or upgraded.
Konstantinos Nikopoulos, Katarina Vizar Cisarova, Mathieu Quinodoz…·Carlo Rivolta
The paper identifies a common variant in the Japanese population that shows quasi-Mendelian inheritance patterns in rare retinal ciliopathy.
Chikashi C. Terao, Akari Suzuki, Yukihide Momozawa…·Yoichiro Kamatani
This study analyzes genomic mutations in clonal hematopoiesis across 179,417 Japanese individuals, revealing population-specific patterns and differences in cancer risk.
Alicia R. Martin, Masahiro Kanai, Yoichiro Kamatani…·Mark J. Daly
Eurocentric GWAS make polygenic scores less accurate in non-Europeans (mean 4.9-fold lower for UK Biobank Africans); equal-sized ancestry-matched GWAS predict better in Japanese and British individuals.
Chizu Tanikawa, Yoichiro Kamatani, Chikashi C. Terao…·Koichi Matsuda
This study identifies 14 nephrolithiasis susceptibility loci in the Japanese population, including 9 novel loci, and links them to metabolic and crystallization pathways.
Deborah J. Thompson, Giulio Genovese, Jonatan Halvardson…·John R. B. Perry
The paper identifies genetic determinants of mosaic Y chromosome loss in blood and links it to genomic instability and non-haematological cancer risk.
Andrew P. Morris, Thu H Le, Hao Wu…·Nora Franceschini
This study identifies 93 genetic loci associated with kidney function across four ancestry groups and highlights causal effects on kidney-related diseases.
Verneri Anttila, Brendan K Bulik-Sullivan, Hilary K. Finucane…·Nicholas A. Furlotte
Genetic correlations across 25 brain disorders (215,683 cases) reveal broad psychiatric common-variant sharing, largely distinct neurological disorders, and migraine as the only significant cross-category link.
Momoko Horikoshi, Felix R. Day, Masato Akiyama…·John R. B. Perry
This study identifies 26 genetic loci associated with reproductive ageing in a Japanese population, highlighting differences in allele frequencies and effect estimates compared to European populations.