Rémi Denise

This study identifies the role of the Tad nanomachine in prey invasion by Bdellovibrio bacteriovorus, showing its polar localization and coordination with the predatory cell cycle.

This paper investigates phage-pathogen interactions in vivo using Citrobacter rodentium and a novel lytic phage, showing stable coexistence without reducing bacterial burden or inflammation.

This study examines how antibiotic treatment affects the gut phageome, finding reduced diversity and increased virulent phage blooms, which may help restore bacterial diversity through kill-the-winner dynamics.

TaxmyPHAGE automates the classification of dsDNA phage genomes into genera and species using MASH and BLASTn, enabling rapid and accurate taxonomic assignment at scale.

MacSyFinder v2 improves molecular system detection in microbial genomes with enhanced modeling, search engine, and updated models.