Author

Valentino E. Browning

University of WashingtonORCID 0000-0002-2345-2240Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:differential expression· 1 Assay:fluorescence / live-cell microscopy· 1

Frequent Co-Authors

Eva K. NicholsiD· 3 shared Brian J. BeliveauiD· 2 shared Andrius Šinkūnas· 1 shared Ashley F. TsueiD· 1 shared Christopher P. LapointeiD· 1 shared Conor K. CamplissoniD· 1 shared Daniel Lucas KerriD· 1 shared David M ShechneriD· 1 shared

Activity by Year

2023-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 23 mutual co-author links

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3 shared papersGenomics

Eva K. NicholsORCID

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3 papers

Recent·Most cited

Predicting cell cycle stage from 3D single-cell nuclear-stained images

Gang Li, Eva K. Nichols, Valentino E. Browning, Nicolas J. Longhi, Madison Sanchez-Forman, Conor K. Camplisson, Brian J. Beliveau, William Stafford Noble

CellCycleNet predicts cell cycle phases from 3D nuclear-stained images, outperforming SVM models and showing strong generalization across microscopes.

Life Science Alliance · Apr 3, 2025Peer-reviewedCell Biology

Capsule-Based Single-Cell Genome Sequencing

Dustin Mullaney, Samantha R. Sgrizzi, David Mai, Ian J. Campbell, Yuqi Huang, Andrius Šinkūnas, Daniel Lucas Kerr, Valentino E. Browning, Helen E. Eisenach, Jeremiah Nelson Sims, Eva K. Nichols, Christopher P. Lapointe, Yasuhiro Amimura, Kelley Harris, Rapolas Žilionis, Sanjay R Srivatsan

This paper introduces a semi-permeable capsule for single-cell genome sequencing, enabling uniform coverage and minimal cross-contamination for detecting genomic variants.

bioRxiv · Mar 14, 2025 · PreprintGenomics

Efficient and highly amplified imaging of nucleic acid targets in cellular and histopathological samples with pSABER

Sahar Attar, Valentino E. Browning, Yuzhen Liu, Eva K. Nichols, Ashley F. Tsue, David M Shechner, Jay Shendure, Joshua A. Lieberman, Shreeram Akilesh, Brian J. Beliveau

The paper introduces pSABER, a method for amplifying in situ hybridization signals in cellular and histopathological samples, achieving 25-fold amplification over conventional methods.

bioRxiv · Jan 30, 2023 · PreprintGenomics