Author

Erin H. Wilson

University of MinnesotaORCID 0000-0002-2446-6513Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Organism:yeast· 3 Research Focus:drug response / drug discovery· 2 Approach:experimental assay· 2 Organism:bacteria (other)· 1 Research Focus:benchmarking· 1 Assay:CRISPR screen· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1

Frequent Co-Authors

Abraham Abera GebreiD· 2 shared Chad L. MyersiD· 2 shared Charles M. BooneiD· 2 shared Hamid SafizadehiD· 2 shared Hiroyuki OsadaiD· 2 shared Jeff S. PiotrowskiiD· 2 shared Justin NelsoniD· 2 shared Mami Yoshimura· 2 shared

Activity by Year

2017-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersSystems Biology

Abraham Abera GebreORCID

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3 papers

Recent·Most cited

An Automated Scientist to Design and Optimize Microbial Strains for the Industrial Production of Small Molecules

Amoolya H. Singh, Benjamin Kaufmann-Malaga, Joshua A. Lerman, Daniel P. Dougherty, Yang Zhang, Alexander L. Kilbo, Erin H. Wilson, Chiam Yu Ng, Onur Erbilgin, Kate A. Curran, Christopher D. Reeves, John E. Hung, Simone Mantovani, Zachary A. King, Marites J. Ayson, , Adam L. Meadows

The paper introduces an automated system called Lila to design and optimize microbial strains for producing small molecules, achieving high titers for naringenin and creating strains for 242 molecules.

bioRxiv · Jan 3, 2023 · PreprintSynthetic Biology

Predicting bioprocess targets of chemical compounds through integration of chemical-genetic and genetic interaction networks

Scott W. Simpkins, Justin Nelson, Raamesh Deshpande, Sheena Claire Li, Jeff S. Piotrowski, Erin H. Wilson, Abraham Abera Gebre, Hamid Safizadeh, Reika Okamoto, Mami Yoshimura, Michael Costanzo, Yoko Yashiroda, Yoshikazu Ohya, Hiroyuki Osada, Minoru Yoshida, , Chad L. Myers

The paper develops CG-TARGET to predict compound biological processes by integrating chemical-genetic and genetic interaction networks, showing improved accuracy and FDR control.

PLoS Computational Biology · Oct 30, 2018Peer-reviewedSystems Biology

Functional Annotation of Chemical Libraries across Diverse Biological Processes

Jeff S. Piotrowski, Sheena Claire Li, Raamesh Deshpande, Scott W. Simpkins, Justin Nelson, Yoko Yashiroda, Jacqueline M. Barber, Hamid Safizadeh, Erin H. Wilson, Hiroki Okada, Abraham Abera Gebre, Karen Kubo, Nikko P. Torres, Marissa A. LeBlanc, Kerry Andrusiak, , Charles M. Boone

This study develops a yeast-based chemical-genetic screening system to annotate compound functionality across biological processes and identifies compounds with dual modes of action.

Nature Chemical Biology · Jul 24, 2017Peer-reviewedSystems Biology