Author

Emilie Calonne

Université Libre de BruxellesORCID 0000-0002-3649-2129Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:statistical model· 4 Assay:bulk RNA-seq· 3 Research Focus:differential expression· 3 Organism:human· 3 Organism:mouse· 3 Research Focus:benchmarking· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:chromatin & epigenetic regulation· 1

Frequent Co-Authors

François FuksiD· 4 shared Martin BizetiD· 3 shared Rachel Deplus· 3 shared Bouchra Hassabi· 2 shared Margot Celerier· 2 shared Pascale Putmans· 2 shared Audrey PenningiD· 1 shared Ben RoedigeriD· 1 shared

Activity by Year

2021-2025 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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4 shared papersMolecular Biology

François FuksORCID

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Author profile →

4 papers

Recent·Most cited

m3C is a mitochondrial mRNA modification which promotes tumor progression

Audrey Penning, Kun Wang, Margot Celerier, Évelyne Collignon, Irina Primac, Louis Van der Linden, Martin Bizet, Emilie Calonne, Bouchra Hassabi, Céline Hubert, Pascale Putmans, Frédéric Murisier, Lionel Larbanoix, Younès Achouri, Jie Lan, , François Fuks

This study identifies m3C as a novel mitochondrial mRNA modification catalyzed by METTL8, which promotes tumor progression by enhancing complex I activity and oncogenic pathways.

bioRxiv · Jan 15, 2025 · PreprintCell Biology

RNA m6A and 5hmC regulate monocyte and macrophage gene expression programs

Natalia Pinello, Renhua Song, Quintin Lee, Emilie Calonne, Kun‐Long Duan, Emilie Wong, Jessica Tieng, Majid Mehravar, Bowen Rong, Fei Lan, Ben Roediger, Cheng-Jie Ma, Bi‐Feng Yuan, John E.J. Rasko, Mark Larance, , Justin J. -L. Wong

The paper investigates how RNA modifications m6A and 5hmC regulate gene expression in monocytes and macrophages during differentiation and polarization, finding their roles in transcript stability and function.

bioRxiv · Nov 3, 2022 · PreprintMolecular Biology

The RNA demethylase FTO controls m6A marking on SARS-CoV-2 and classifies COVID-19 severity in patients

Lionel Malbec, Margot Celerier, Martin Bizet, Emilie Calonne, Heike Hofmann-Winkler, Bram Boeckx, Rana Abdelnabi, Pascale Putmans, Bouchra Hassabi, Lieve M. J. Naesens, Diether Lambrechts, Stefan Pöhlmann, Rachel Deplus, Leen Delang, Jana Jeschke, François Fuks

This study shows that FTO affects m6A marking on SARS-CoV-2 RNA and correlates with COVID-19 severity in patients.

bioRxiv · Jun 27, 2022 · PreprintMolecular Biology

The chromatin remodeler LSH controls genome-wide cytosine hydroxymethylation

Maud de Dieuleveult, Martin Bizet, Laurence Colin, Emilie Calonne, Martin Bachman, Chao Li, Irina Stancheva, Benoît Miotto, François Fuks, Rachel Deplus

This study shows that LSH regulates 5-hydroxymethylcytosine levels in mouse cells, with TET proteins relying on LSH to establish genome-wide 5hmC patterns.

Epigenetics · May 7, 2021Peer-reviewedMolecular Biology