Author

Naomi A. Stover

Bradley UniversityORCID 0000-0002-6340-303XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:gene regulatory network inference· 4 Approach:statistical model· 4 Assay:whole-genome sequencing· 3 Assay:bulk RNA-seq· 2 Research Focus:database / resource· 2 Assay:ATAC-seq· 1 Research Focus:differential expression· 1 Assay:DNA methylation· 1

Frequent Co-Authors

Adam ByerlyiD· 2 shared Aditi D. SinghiD· 2 shared Brandon Kwee Boon SeahiD· 2 shared Bruno HüetteliD· 2 shared Christian WoehleiD· 2 shared Christiane EmmerichiD· 2 shared Estienne Carl SwartiD· 2 shared Mayumi Sugiura· 2 shared

Activity by Year

2018-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersGenomics

Adam ByerlyORCID

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Author profile →

4 papers

Recent·Most cited

Comprehensive genome annotation of the model ciliate Tetrahymena thermophila by in-depth epigenetic and transcriptomic profiling

Fei Ye, Xiao Chen, Yuan Li, Aili Ju, Yalan Sheng, Lili Duan, Jiachen Zhang, Zhe Zhang, Khaled A. S. Al‐Rasheid, Naomi A. Stover, Shan Gao

This study improves gene annotation in Tetrahymena thermophila by integrating transcriptomic and epigenetic data, adding new genes and UTRs while identifying antisense transcripts.

Nucleic Acids Research · Nov 12, 2024Peer-reviewedBioinformatics

MITE infestation of germline accommodated by genome editing in Blepharisma

Brandon Kwee Boon Seah, Minakshi Singh, Christiane Emmerich, Aditi D. Singh, Christian Woehle, Bruno Hüettel, Adam Byerly, Naomi A. Stover, Mayumi Sugiura, Terue Harumoto, Estienne Carl Swart

The paper analyzes IESs in Blepharisma stoltei, revealing MITEs as a major source of IESs and challenging current models of transposon domestication in ciliates.

bioRxiv · May 2, 2022 · PreprintGenomics

Genome editing excisase origins illuminated by somatic genome of Blepharisma

Minakshi Singh, Brandon Kwee Boon Seah, Christiane Emmerich, Aditi D. Singh, Christian Woehle, Bruno Hüettel, Adam Byerly, Naomi A. Stover, Mayumi Sugiura, Terue Harumoto, Estienne Carl Swart

The paper reports the somatic genome of Blepharisma stoltei, identifying a PiggyBac transposase homolog as a potential IES excisase, suggesting an evolutionary origin for genome editing.

bioRxiv · Dec 14, 2021 · PreprintGenomics

Genome analysis of the unicellular eukaryote Euplotes vannus reveals molecular basis for sex determination and tolerance to environmental stresses

Xiao Chen, Yaohan Jiang, Feng Gao, Weibo Zheng, Timothy J. Krock, Naomi A. Stover, Chao Lü, Laura A. Katz, WEIBO B. SONG

This study analyzes the genome and transcriptome of Euplotes vannus to uncover molecular mechanisms of sex determination and stress tolerance.

bioRxiv · Sep 11, 2018 · PreprintGenomics