Author

Deng Pan

Center for Life SciencesORCID 0000-0002-6475-0463Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Deng Pan6 papers · Chinese Academy of Sciences

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Cancer Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Organism:human· 2 Research Focus:benchmarking· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Approach:deep learning· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1

Frequent Co-Authors

Anthony CheniD· 1 shared Birgit SchillingiD· 1 shared Bowen QiniD· 1 shared Chira Chen‐Tanyolac· 1 shared Christie L. HunteriD· 1 shared Cunyu Wang· 1 shared Haorui ZhangiD· 1 shared HJ XuiD· 1 shared

Activity by Year

2025-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

1 shared paperBioinformatics

Anthony ChenORCID

Mutual co-authors in cluster

Author profile →

2 papers

Recent·Most cited

A multimodal foundation model to integrate histology with spatial molecular programs

Zongxu Zhang, Bowen Qin, Yu Zhao, Zekun Qi, HJ Xu, Yunfeng Wang, Wenjin Zheng, Jiateng Dai, Anthony Chen, Hongtao Wang, Lanxi Nie, Peng Zhang, Haorui Zhang, Tian Xu, Siyu Lin, , Zexian Zeng

SQUALL integrates histology and spatial transcriptomics to enable virtual spatial gene expression profiling and clinical prediction across cancers and platforms.

bioRxiv · Oct 13, 2026 · PreprintBioinformatics

Proteomic Analysis of Breast Cancer Subtypes Identifies Stromal Protein Profiles that Contribute to Aggressive Malignant Behavior

Jordan B. Burton, Philippe D. Gascard, Deng Pan, Joanna Bons, Rosemary Bai, Chira Chen‐Tanyolac, Joseph A. Caruso, Christie L. Hunter, Birgit Schilling, Thea Dorothy Tlsty

The paper identifies stromal protein profiles in breast cancer subtypes using proteomic analysis of FFPE tissues, revealing significant ECM and immune-related changes, particularly in metaplastic breast cancer.

bioRxiv · Jan 21, 2025 · PreprintCancer Biology