Author

Sara B. Rosenthal

University of California San DiegoORCID 0000-0002-6548-9658Unclaimed ORCID profile · follow to get notified of new preprints

Additional preprints under this name without ORCID

Sara B. Rosenthal1 paper · RIKEN Center for Brain Science

Biology Disciplines

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Bioinformatics· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

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Organism:human· 2 Approach:biophysical modeling· 1 Assay:bulk RNA-seq· 1 Research Focus:database / resource· 1 Research Focus:differential expression· 1 Research Focus:drug response / drug discovery· 1 Approach:experimental assay· 1 Research Focus:host-pathogen & immune response· 1

Frequent Co-Authors

Advait SubramanianiD· 1 shared Afshin BeheshtiiD· 1 shared Alan D. FrankeliD· 1 shared Alice Mac KainiD· 1 shared Alicia RichardsiD· 1 shared Alicia VillacampaiD· 1 shared Amanda Saravia-ButleriD· 1 shared Benjamin J. PolaccoiD· 1 shared

Activity by Year

2020-2021 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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1 shared paperSystems Biology

Advait SubramanianORCID

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2 papers

Recent·Most cited

NASA GeneLab RNA-Seq Consensus Pipeline: Standardized Processing of Short-Read RNA-Seq Data

Eliah G. Overbey, Amanda Saravia-Butler, Zhe Zhang, Komal S. Rathi, Homer W. Fogle, Willian A. da Silveira, Richard John Barker, Joseph J. Bass, Afshin Beheshti, Daniel C. Berrios, Elizabeth A. Blaber, Egle Cekanaviciute, Helio A. Costa, Laurence B Davin, Kathleen M Fisch, , Jonathan M. Galazka

The paper describes a standardized RNA-Seq pipeline for spaceflight data, enabling reproducible analysis of gene expression changes in astronauts and organisms exposed to spaceflight.

iScience · Mar 26, 2021Peer-reviewedBioinformatics

A SARS-CoV-2-Human Protein-Protein Interaction Map Reveals Drug Targets and Potential Drug-Repurposing

David Ezra Gordon, Gwendolyn Μ. Jang, Mehdi Bouhaddou, Jiewei Xu, Kirsten Obernier, Kris M. White, Matthew J. O’Meara, Veronica V. Rezelj, Jeffrey Z. Guo, Danielle L. Swaney, Tia A. Tummino, Ruth Hüttenhain, Robyn M. Kaake, Alicia Richards, Beril Tutuncuoglu, , Natalia Jura

Affinity-purification mass spectrometry of 26 SARS-CoV-2 proteins in HEK293T cells yields 332 high-confidence host interactions and 67 druggable human proteins with known compounds.

Nature · Apr 30, 2020Peer-reviewedSystems Biology✦ In-depth digest