Author

Jungmin Nam

Yale UniversityORCID 0000-0002-6717-1328Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 3 Organism:human· 3 Assay:imaging· 3 Assay:spatial transcriptomics· 3 Approach:experimental assay· 2 Organism:mouse· 2 Research Focus:batch correction / integration· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

Negin FarzadiD· 3 shared Rong FaniD· 3 shared Anthony A. FungiD· 2 shared Archibald EnninfuliD· 2 shared Mina Luqing XuiD· 2 shared Nancy Ruonan ZhangiD· 2 shared Zhiliang BaiiD· 2 shared Zongming MaiD· 2 shared

Activity by Year

2026-2026 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 38 mutual co-author links

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3 shared papersCell Biology

Negin FarzadORCID

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

All-Optical Multimodal Mapping of Single Cell Type-Specific Metabolic Activities via REDCAT

Yajuan Li, Zhaojun Zhang, Archibald Enninful, Negin Farzad, Presha Rajbhandari, Hua Tian, Jungmin Nam, Xiaoyu Qin, Jorge I. Villazon, Anthony A. Fung, Hongje Jang, Zhiliang Bai, Nancy Ruonan Zhang, Brent R. Stockwell, Rong Fan, , Lingyan Shi

REDCAT maps single-cell type-specific metabolic activities in tissues using multimodal all-optical imaging, revealing metabolic specialization and reprogramming in immune and liver tissues.

Nature Methods · Aug 27, 2026Peer-reviewedCell Biology

Decoding and Targeting Coordinated CDKN1A and CDKN2A Senescence Programs in ECM-Dominant Cardiovascular Pathologies

Fu Gao, Anthony A. Fung, D Zhang, Xing Lou, Jungmin Nam, Mingyu Yang, Xiaolong Tian, Negin Farzad, Dejiang Wang, Gaocai Li, Xiangjun Di, Shujie He, Mei Zhong, Arnar Geirsson, Liu Yang, Rong Fan

This study identifies ECM-dominant cardiovascular diseases as driven by coordinated CDKN1A and CDKN2A senescence programs in fibroblasts and shows senolytic treatments improve cardiac function.

bioRxiv · Jun 20, 2026 · PreprintCell Biology

Integration of Imaging-based and Sequencing-based Spatial Omics Mapping on the Same Tissue Section via DBiTplus

Archibald Enninful, Zhaojun Zhang, Dmytro Klymyshyn, Matthew H. Ingalls, Mingyu Yang, Hailing Zong, Zhiliang Bai, Negin Farzad, Graham Su, Alev Baysoy, Jungmin Nam, Yao Lu, Shuozhen Bao, Siyan Deng, Nancy Ruonan Zhang, , Rong Fan

Thermostable RNaseH release of barcoded cDNA keeps sections intact for CODEX imaging, yielding same-section whole-transcriptome and protein maps plus CODEX-guided spot deconvolution in FFPE tissues.

Nature Methods · Jan 15, 2026Peer-reviewedSystems Biology✦ In-depth digest