Author

Hongqi Wang

BGI Group (China)ORCID 0000-0002-6986-198XUnclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Assay:ChIP-seq· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Research Focus:genome assembly· 1 Assay:Hi-C· 1 Assay:long-read sequencing· 1 Assay:scRNA-seq· 1

Frequent Co-Authors

Chen ZhangiD· 2 shared Chong TangiD· 2 shared Mei Li GuoiD· 2 shared Weitian CheniD· 2 shared Wenfang CheniD· 2 shared Yeming XieiD· 2 shared Yitong FangiD· 2 shared Zhe XieiD· 2 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

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2 shared papersGenomics

Chen ZhangORCID

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3 papers

Recent·Most cited

Spatial chromatin accessibility sequencing resolves high-order spatial interactions of epigenomic markers

Yeming Xie, Fengying Ruan, Yaning Li, Meng Luo, Chen Zhang, Zhichao Chen, Zhe Xie, Zhe Weng, Weitian Chen, Wenfang Chen, Yitong Fang, Yuxin Sun, Mei Li Guo, Juan Wang, Shouping Xu, , Chong Tang

This study introduces SCA-seq to resolve spatial chromatin interactions at single-molecular resolution and demonstrates its application in analyzing epigenomic markers.

eLife · Jan 18, 2024Peer-reviewedGenomics

Whole genome sequencing reveals autooctoploidy in the Chinese sturgeon and its evolutionary trajectories

Binzhong Wang, Bin Wu, Xueqing Liu, Yacheng Hu, Yao Ming, Mingzhou Bai, Juanjuan Liu, Kan Xiao, Qingkai Zeng, Jing Yang, Hongqi Wang, Baifu Guo, Chun Hong Tan, Zixuan Hu, Xun Zhao, , Hejun Du

This study sequenced the Chinese sturgeon genome, revealing it is a complex autooctoploid species and providing insights into its ploidy evolution through two rounds of whole genome duplications.

Genomics Proteomics & Bioinformatics · Dec 13, 2023Peer-reviewedGenomics

Improving the RNA velocity approach using long-read single cell sequencing

Chen Zhang, Weitian Chen, Yitong Fang, Zhichao Chen, Yeming Xie, Wenfang Chen, Zhe Xie, Mei Li Guo, Juan Wang, Chen Tan, Hongqi Wang, Chong Tang

The paper improves RNA velocity analysis by incorporating long-read single-cell sequencing to better capture gene expression dynamics and cell fate transitions.

bioRxiv · May 2, 2022 · PreprintBioinformatics