Author

Yosuke Bando

KIOXIA Corporation (Japan)ORCID 0000-0002-9150-6503Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Signature Assays, Organisms & Methods

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Approach:experimental assay· 3 Organism:mouse· 3 Assay:spatial transcriptomics· 3 Research Focus:cell type annotation· 2 Research Focus:benchmarking· 1 Organism:C. elegans· 1 Research Focus:gene regulatory network inference· 1 Organism:human· 1

Frequent Co-Authors

Adam Henry MarblestoneiD· 2 shared Andrew G. XueiD· 2 shared Anubhav SinhaiD· 2 shared Asmamaw T. Wassie· 2 shared Atsushi Kajita· 2 shared Daniel GoodwiniD· 2 shared Edward S. BoydeniD· 2 shared George McDonald ChurchiD· 2 shared

Activity by Year

2021-2026 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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2 shared papersNeuroscience

Adam Henry MarblestoneORCID

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Author profile →

3 papers

Recent·Most cited

RnR-ExM: Robust Non-rigid Registration Challenge for Expansion Microscopy Volumes

Emma Besier, Ruihan Zhang, Yosuke Bando, Mansour Alawi, Yves Quéméner, Chaitanya Kapoor, Malte Hoffmann, Adrian Dalca, Adrià Casamitjana, Ignacio Arganda‐Carreras, Greg M. Fleishman, Xi Jia, Jinming Duan, Tony C W Mok, Zi Li, , Donglai Wei

The paper presents a challenge for 3D registration of expansion microscopy volumes, evaluates top methods, and highlights future directions for ExM registration.

bioRxiv · Oct 25, 2026 · PreprintNeuroscience

Expansion Sequencing of RNA Barcoded Neurons in the Mammalian Brain: Progress and Implications for Molecularly Annotated Connectomics

Daniel Goodwin, Alex Vaughan, Daniel Leible, Shahar Alon, Gilbert Lee Henry, Anne Cheng, Xiaoyin Chen, Ruihan Zhang, Andrew G. Xue, Asmamaw T. Wassie, Anubhav Sinha, Yosuke Bando, Atsushi Kajita, Adam Henry Marblestone, Anthony M. Zador, , Richie E. Kohman

The paper introduces ExBarSeq, a method for high-resolution multiplexing of barcodes and synaptic proteins in neurons, demonstrating its application in mouse brain tissue.

bioRxiv · Jul 31, 2022 · PreprintNeuroscience

Expansion Sequencing: Spatially Precise In Situ Transcriptomics in Intact Biological Systems

Shahar Alon, Daniel Goodwin, Anubhav Sinha, Asmamaw T. Wassie, Fei Chen, Evan R Daugharthy, Yosuke Bando, Atsushi Kajita, Andrew G. Xue, Karl Marrett, Robert Prior, Yi Cui, Andrew C. Payne, Chun‐Chen Yao, Ho‐Jun Suk, , Kirsty Sawicka

ExSeq enables multiplexed RNA mapping at nanoscale resolution by expanding biological specimens for in situ sequencing.

Science · Jan 28, 2021Peer-reviewedGenomics