Author

Arun Narasimhan

Cold Spring Harbor LaboratoryORCID 0000-0002-0246-6301Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

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Neuroscience· 5

Signature Assays, Organisms & Methods

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Organism:mouse· 5 Approach:experimental assay· 4 Assay:imaging· 3 Research Focus:cell type annotation· 2 Research Focus:clustering· 1 Research Focus:spatial domain detection· 1 Assay:spatial transcriptomics· 1 Approach:statistical model· 1

Frequent Co-Authors

Pavel OsteniD· 5 shared Judith MizrachiiD· 4 shared Rhonda DrewesiD· 3 shared Rodrigo Muñoz-CastañedaiD· 3 shared Xiaoli QiiD· 3 shared Corey ElowskyiD· 2 shared Hanchuan PengiD· 2 shared Jason PalmeriD· 2 shared

Activity by Year

2017-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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5 shared papersNeuroscience

Pavel OstenORCID

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5 papers

Recent·Most cited

High-throughput confocal airy beam oblique light-sheet tomography of brain-wide imaging at single-cell resolution

Xiaoli Qi, Rodrigo Muñoz-Castañeda, Arun Narasimhan, Liya Ding, Xin Chen, Corey Elowsky, Jason Palmer, Rhonda Drewes, Jianjun Sun, Judith Mizrachi, Hanchuan Peng, Zhuhao Wu, Pavel Osten

bioRxiv · Jun 4, 2023 · PreprintNeuroscience

Cellular Anatomy of the Mouse Primary Motor Cortex

Rodrigo Muñoz-Castañeda, Brian Zingg, Katherine S. Matho, Xiaoyin Chen, Quanxin Wang, Nicholas N. Foster, Anan Li, Arun Narasimhan, Karla E. Hirokawa, Bing‐Xing Huo, Samik Bannerjee, Laura Korobkova, Chris Sin Park, Young-Gyun Park, Michael S. Bienkowski, , Hong‐Wei Dong

The paper provides a detailed cellular-resolution map of the mouse primary motor cortex, defining cell types and their connectivity.

Nature · Oct 6, 2021Peer-reviewedNeuroscience

Super-resolution light-sheet fluorescence microscopy by SOFI.

Judith Mizrachi, Arun Narasimhan, Xiaoli Qi, Rhonda Drewes, Zhuhao Wu, Rodrigo Muñoz-Castañeda, Katie Schaukowitch, Marius Wernig, Pavel Osten

The paper introduces LS-SOFI, a method combining light-sheet fluorescence microscopy and super-resolution optical fluctuation imaging for fast nanoscale-resolution imaging in 3D tissues.

bioRxiv · Aug 17, 2020 · PreprintNeuroscience

Genetic dissection of glutamatergic neuron subpopulations and developmental trajectories in the cerebral cortex

Katherine S. Matho, Dhananjay Huilgol, William Galbavy, Miao He, Gukhan Kim, Xu An, Jiangteng Lu, Priscilla Wu, Daniela J. Di Bella, Ashwin S. Shetty, Ramesh Palaniswamy, Joshua T. Hatfield, Ricardo Raudales, Arun Narasimhan, Eric Gamache, , Z. Josh Huang

The paper develops genetic tools to dissect glutamatergic neuron subpopulations and their developmental trajectories in the cerebral cortex.

bioRxiv · Apr 22, 2020 · PreprintNeuroscience

Oblique light-sheet tomography: fast and high resolution volumetric imaging of mouse brains

Arun Narasimhan, Kannan Umadevi Venkataraju, Judith Mizrachi, Dinu Florin Albeanu, Pavel Osten

This paper introduces a new light-sheet microscopy technique for high-resolution volumetric imaging of whole mouse brains.

bioRxiv · Jul 5, 2017 · PreprintNeuroscience