Author

Jacek Biesiada

University of CincinnatiORCID 0000-0003-0435-2225Unclaimed ORCID profile · follow to get notified of new preprints

Biology Disciplines

Click to filter author papers

Bioinformatics· 1 Cancer Biology· 1 Developmental Biology· 1 Systems Biology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Organism:human· 2 Approach:statistical model· 2 Research Focus:benchmarking· 1 Research Focus:cancer & tumor microenvironment· 1 Research Focus:cell type annotation· 1

Frequent Co-Authors

Mario MedvedoviciD· 3 shared Behrouz ShamsaeiiD· 2 shared David R. PlasiD· 2 shared Jarek MelleriD· 2 shared Nicholas A. ClarkiD· 2 shared Wen NiuiD· 2 shared Yan ReniD· 2 shared Alvaro PugaiD· 1 shared

Activity by Year

2020-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 31 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

3 shared papersDevelopmental Biology

Mario MedvedovicORCID

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

Cancer BiologyCancer DiscoveryPeer-reviewedOct 30, 2024

Copper drives remodeling of metabolic state and progression of clear cell renal cell carcinoma

Megan E. Bischoff, Behrouz Shamsaei, Juechen Yang…·Maria Czyzyk-Krzeska

This study shows copper drives metabolic remodeling and progression in clear cell renal cell carcinoma by coordinating bioenergy, biosynthesis, and redox homeostasis.

32 citationstop 4%

humanbulk RNA-seq

𝕏 PostBluesky

Developmental BiologybioRxivPreprintApr 20, 2023

The Role of MAP3K1 in the Development of the Female Reproductive Tract

Eiki Kimura, Maureen Mongan, Bo Xiao…·Ying Xia

This paper investigates the role of MAP3K1 in female reproductive tract development, showing that its deficiency leads to developmental defects and infertility.

2 citations

mouseexperimental assay

𝕏 PostBluesky

BioinformaticsNature CommunicationsPeer-reviewedAug 9, 2022

Connecting omics signatures of diseases, drugs, and mechanisms of actions with iLINCS

Marcin Pilarczyk, Mehdi Fazel‐Najafabadi, Michal Kouril…·Mario Medvedovic

iLINCS provides a web-based platform for analyzing omics signatures of diseases and cellular perturbations through integrative analytics and visualization tools.

156 citationstop 1%

experimental assaydatabase / resource

𝕏 PostBluesky

Systems BiologyBioinformaticsPeer-reviewedJul 3, 2020

Predicting mechanism of action of cellular perturbations with pathway activity signatures

Yan Ren, Siva Sivaganesan, Nicholas A. Clark…·Mario Medvedovic

The paper develops a method to predict the mechanism of action of cellular perturbations by analyzing pathway network topology and transcriptional signatures.

6 citations

humanbulk RNA-seq

𝕏 PostBluesky