Jinnan Hu

The paper introduces DNAscope Hybrid, a pipeline combining short and long-read sequencing for improved variant calling accuracy and efficiency.

The paper introduces and benchmarks DNAscope LongRead and Hybrid pipelines for variant calling on ONT data, showing high accuracy and efficiency in SNP, Indel, and Structural Variant detection.

This study introduces a consensus-based ctDNA analysis pipeline that improves accuracy and efficiency in detecting low-frequency somatic variants from non-UMI liquid biopsy data.

CRISPR-Detector detects, visualizes, and annotates genome-wide mutations from CRISPR/Cas gene editing events with improved speed, scalability, and accuracy.

The paper introduces the Sentieon ctDNA pipeline for accurate and efficient small somatic variant calling from ctDNA sequencing data, showing improved accuracy over existing methods.

DNAscope improves small variant calling accuracy and reduces computational cost compared to DNAseq using a machine-learned genotyping model.