The paper analyzes 385 Pg genomes to show Kazakhstan hosts a diverse sexual clade with many HD haplotypes, and Pgs contributes virulent alleles to wheat rust pathogens.

bioRxiv · Oct 14, 2026 · PreprintPlant Biology

A single-nucleus and spatial transcriptomic atlas of the COVID-19 liver reveals topological, functional, and regenerative organ disruption in patients

Yered H. Pita-Juárez, Dimitra Karagkouni, Nikolaos Kalavros, Johannes C. Melms, Sebastian Niezen, Toni Marie Delorey, Adam L. Essene, Olga Rachel Brook, Deepti B. Pant, Disha Skelton-Badlani, Pourya Naderi Yeganeh, Pinzhu Huang, Liuliu Pan, TYLER D. HETHER, Tallulah S. Andrews, , Ioannis S. Vlachos

This study creates a single-nucleus and spatial transcriptomic atlas of the COVID-19 liver, revealing cellular and functional disruptions associated with organ damage.

Genome biology · Mar 14, 2025Peer-reviewedGenomics

A spatially-resolved transcriptional atlas of the murine dorsal pons at single-cell resolution

Stefano Nardone, Roberto De Luca, Antonino Zito, Nataliya Klymko, Dimitris Nicoloutsopoulos, Oren Amsalem, Cory Brannigan, Jon M. Resch, Christopher L. Jacobs, Deepti B. Pant, Molly L. Veregge, Harini Srinivasan, Ryan M. Grippo, Zongfang Yang, Mark L. Zeidel, , Bradford B. Lowell

This study creates a spatially-resolved transcriptional atlas of the murine dorsal pons using snRNA-seq and MERFISH, identifying 120 neuronal subtypes and their spatial distribution.

Nature Communications · Mar 4, 2024Peer-reviewedNeuroscience