bioRxivGenomicsPreprint
The Greenland shark (Somniosus microcephalus) genome provides insights into extremelongevity
Arne SahmiD, Alexander V. CherkasoviD, Hequn Liu, Danila VoronoviD, Kanstantsin Siniuk, Robert J. SchwarziD, Oliver Ohlenschlaeger, Silke Förste, Martin BensiD, Marco GrothiD, Ivonne Görlich, Sonia Paturej, Sven KlagesiD, Bjoern Braendl, Jesper OlseniD, Peter G. BushnelliD, Amalie Bech Poulsen, Sara FerrandoiD, Fulvio GaribaldiiD, Davide Lorenzo Drago, Eva Terzibasi TozziniiD, Franz-Josef Mueller, Martin FischeriD, Helene KretzmeriD, Paolo DomeniciiD, , Steve HoffmanniD
Abstract
The Greenland shark (Somniosus microcephalus) is the longest-lived vertebrate known, with an estimated lifespan of [~] 400 years. Here, we present a chromosome-level assembly of the 6.45 Gb Greenland shark, rendering it one of the largest non-tetrapod genomes sequenced so far. Expansion of the genome is mostly accounted for by a substantial expansion of transposable elements. Using public shark genomes as a comparison, we found that genes specifically duplicated in the Greenland shark form a functionally connected network enriched for DNA repair function. Furthermore, we identified a unique insertion in the conserved C-terminal region of the key tumor suppressor p53. We also provide a public browser to explore its genome.
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