bioRxivSynthetic BiologyPreprint
Single-component optogenetic control enables human portrait formation in cells
Fatma Yilmaz‐AtayiD, Merve KocogluiD, Busra Nur CevikiD, Asli Ceren EkeriD, Eda Demirozcan-KuruniD, Nuri ÖztürkiD
Abstract
Continued exploration of novel photoreceptors is essential for advancing optogenetic tools, as differences in their reaction mechanisms and spectral sensitivity could enhance the versatility of available systems. While circadian clock photoreceptors represent promising candidates, only Arabidopsis Cryptochrome 2 (AtCRY2) has been widely adopted in current applications. Notably, both the light-dependent interaction of AtCRY2 with the CIB1 protein and its homodimerization have been exploited for diverse optogenetic applications. In our search for alternative circadian photoreceptors for optogenetic control, we aimed to develop a system functioning without the co-expression of interacting partners. In this context, Drosophila Cryptochrome (DmCRY) was a promising candidate due to its well-characterized photoreceptor function and defined light-dependent reaction mechanism. Upon illumination, DmCRY undergoes a conformational change that enables interactions with Jetlag and Timeless proteins, facilitating circadian clock resetting. DmCRY is also targeted for degradation via ubiquitylation by Jetlag and/or BRWD3, ensuring resetting occurs only once each morning. Notably, DmCRY is susceptible to light-induced degradation even when expressed in mammalian cells. Leveraging this property, we fused the Tet repressor (TetR) to the C-terminus of DmCRY to enable light-dependent regulation of gene expression via TetR-responsive elements. We demonstrate that this system modulates expression of Cas9 for gene knockout, dCas9 for transcriptional regulation, and recombinant proteins. Furthermore, using these tools with a photomasking technique, we generated human portrait images from cultured cells. These findings highlight DmCRY as a versatile optogenetic tool capable of controlling cellular processes with standard visible light, with potential for novel optogenetic platforms.
- organism: human
- organism: Drosophila
- research focus: drug response / drug discovery
- research focus: protein design
- approach: experimental assay
- Citations
- 0
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Live-cell imaging of circadian clock protein dynamics in CRISPR-generated knock-in cells
C. H. Gabriel, M. del Olmo, … A. Kramer·bioRxiv·Feb 28, 2020
- Dissecting neuron-specific functions of circadian genes using modified cell-specific CRISPR approaches
Shlesha Richhariya, Daniel Shin, … Michael Rosbash·Proceedings of the National Academy of SciencesPeer-reviewed·Jul 10, 2023
- Optimized optogenetic anti-CRISPR for endogenous gene regulation in Drosophila
Clarissien Ramongolalaina, José Carlos Pastor-Pareja, … Yichang Jia·Nucleic Acids ResearchPeer-reviewed·May 4, 2026
- Transient light-activated gene expression in Chinese hamster ovary cells
S. A. Minami, P. S. Shah·bioRxiv·Oct 22, 2020
- Coupling optogenetics and light-sheet microscopy to study signal transduction in vivo
Prameet Kaur, Timothy E. Saunders, Nicholas S. Tolwinski·Scientific ReportsPeer-reviewed·Nov 24, 2017
- Full-length Cryptochrome 1 in the outer segments of the retinal blue cone photoreceptors in humans and great apes suggests a role beyond transcriptional repression
Rabea Bartölke, Christine Nießner, … Michael Winklhofer A·The FASEB JournalPeer-reviewed·Apr 25, 2025