GM-CSF differentiation of human monocytes stabilizes macrophage state via oxidative signaling
C. Y. Itoh, C. Gunnarson, G. H. Babunovic, A. Nibasumba, N. A. Akilimali, M. H. Wadsworth, T. H. Hughes, S. L. Solomon, B. Hie, B. Berger, A. K. Shalek, S. M. Fortune, B. D. Bryson
Abstract
Macrophages are central mediators of immunity that integrate diverse signals derived from differentiation cues, tissue location, and disease. Controlling macrophage state and function is an appealing therapeutic objective across many diseases including cancer, atherosclerosis, and tuberculosis. Despite the growing appreciation for the in vivo complexity of macrophage state, existing in vitro models of human monocyte-derived macrophages have used a limited number of individual perturbations to explore the complex phenotypic space that macrophages can occupy. Here, we leverage a tiered differentiation, activation, and stimulation strategy to generate libraries of in vitro monocyte-derived macrophages and examine the in vitro state space of macrophage function using high-dimensional technologies. Our tiered experimental approach further revealed a striking relationship between GM-CSF differentiation and IL-10 production. Cells that were differentiated with GM-CSF produced very low or undetectable levels of IL-10 independent of activation or stimulation condition. To nominate candidate regulators of this IL-10 response, we leverage unbiased single-cell mRNA sequencing to identify transcriptional networks associated with GM-CSF-derived cells. Using these data, we identify oxidative signaling pathways as upregulated in GM-CSF derived cells and demonstrate that scavenging of oxidative radicals can enhance IL-10 production in these cells. Collectively, these data underscore the complexity of monocyte-derived macrophage state over time and highlight a dominant role for GM-CSF in tuning macrophage inflammatory phenotype, metabolic state, and plasticity.
02 /Specification & Classification
Click any tag to browse matching papers- Organism
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- CIS calibrates GM-CSF signalling strength to regulate macrophage polarization via a STAT5-IRF8 axis
s. zhang, J. Rautela, … Y. Zhan·bioRxiv·Mar 31, 2022
- GM-CSF negatively regulates early IL-10 mediated responses
R. H. P. Wilbers, L. B. Westerhof, … A. Schots·bioRxiv·Oct 13, 2017
- Role of GM-CSF in regulating metabolism and mitochondrial functions critical to macrophage proliferation
M. Wessendarp, M. Watanabe, … P. Arumugam·bioRxiv·Feb 10, 2021
- Re-programming of GM-CSF-dependent alveolar macrophages through GSK3 activity modulation
Israel Ríos, Cristina Herrero, … Angel Luis Corbí·eLifePeer-reviewed·May 14, 2025
- A streamlined and comprehensive protocol for the generation and multi-omic analysis of human monocyte-derived macrophages
Olivia Palmer, Laurent Perreard, … Brittany A. Goods·BMC BiotechnologyPeer-reviewed·Dec 29, 2025
- Dysregulated functional and metabolic response in multiple sclerosis patient macrophages correlate with a more inflammatory state, reminiscent of trained immunity
Jennifer Fransson, Corinne Bachelin, … Violetta Zujovic·bioRxiv·Jan 13, 2021