53BP1 condensates function as bioreactors for NHEJ directed DNA repair and insulators to determine pathway choice
Mikael V. GarabedianiD, Tianpeng ZhangiD, Arindam DattaiD, Wentao Wang, Maxwell WadleyiD, Roger A. GreenbergiD, Matthew C. GoodiD
Abstract
Genomic integrity requires efficient resolution of DNA damage. Non-homologous end joining (NHEJ) is the primary mechanism of DNA double strand break (DSB) repair in mammalian cells and is mediated by 53BP1, a tumor suppressor involved in preventing DSB end-resection and homologous recombination. NHEJ repair foci form following DSB formation, however how mesoscale assembly occurs and whether 53BP1 is the driver of this process are unknown. Also, despite knowledge of the identify of key pathway molecules, the specific functions of mesoscale repair condensates in DNA repair and pathway selectivity are unknown. To address these gaps, we determined the minimal domain of 53BP1 sufficient for phase separation in vitro and identified the key residues that governing its condensation. Utilizing a separation-of-function mutant, we demonstrate that 53BP1and its protein condensation is the core driver of NHEJ foci formation. 53BP1 condensates function as bioreactor compartments, increasing the effective concentration of substrates near double strand breaks and are essential for efficient DNA damage resolution. Additionally, we show that 53BP1 condensates function as insulators around DSB sites to prevent end-resection and direct repair pathway selectivity. Collectively our work reveals a specialized compartment for DNA repair through the spatial clustering of 53BP1 molecules into repair foci essential to maintain genome integrity.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 1
- Organism
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Multifunctional properties of Nej1XLF C-terminus promote end-joining and impact DNA double-strand break repair pathway choice
Aditya Mojumdar, Nancy Adam, Jennifer A. Cobb·DNA repairPeer-reviewed·Apr 28, 2022
- Phosphatidylinositol 3-phosphate promotes 53BP1 condensate-like assembly at DNA double-strand breaks
Nan Xiong, Gaofeng Cui, … Michael S.Y. Huen·bioRxiv·May 16, 2026
- ZEB1 is Required for NHEJ-Mediated DSB Repair in Euchromatin
T. L. Genetta, T. Abbas, … J. M. Larner·bioRxiv·May 13, 2020
- FAM35A co-operates with REV7 to coordinate DNA double-strand break repair pathway choice.
A. Orthwein, S. Findlay, … H. Kuasne·bioRxiv·Jul 11, 2018
- USP47 regulates a 53BP1-based complex function in DNA DSB repair
Doraid Tarek Sadideen, Baowei Chen, … Montaser F. Shaheen·bioRxiv·Jan 27, 2021
- Single-molecule imaging reveals the kinetics of non-homologous end-joining in living cells
M. Mikhova, T. Janovic, … J. C. Schmidt·bioRxiv·Jun 22, 2023