bioRxivBiophysicsPreprint
Competing Molecular Interactions Govern the Dynamical Arrest of G3BP1 Condensates
Anurag SinghiD, Vicky Liu, Tharun Selvam MahendraniD, Aoon RizviiD, Bhargavi H. Gindra, Brian D. FreibaumiD, Hong Joo KimiD, J. Paul TayloriD, Rohit V. PappuiD, Priya R. BanerjeeiD
Abstract
G3BP1 is a central scaffold of stress granules (SGs). Upon cellular stress, G3BP1 forms complex coacervates with translationally repressed mRNAs and recruits multiple RNA-binding proteins to form reversible biomolecular condensates. Persistent SGs are linked to age-dependent dynamical arrest and impaired disassembly. Here, we employ active and passive nanoscale rheology with optical tweezers to show that G3BP1 condensates evolve from being dominantly viscous fluids to dynamically arrested network glasses characterized by nanoscale caging and elastic memory. Integrating atomistic and coarse-grained simulations with experiments, we find that electrostatic interactions between the oppositely charged intrinsically disordered regions drive condensate ageing. RNA modulates these interactions in a length-and structure-dependent manner, delaying dynamic arrest, whereas Caprin-1 binding to the NTF2L domain has little effect. Together, these findings reveal how competing inter-IDR and IDR-RNA interactions govern condensate ageing and material-state transitions. The findings have broader implications for the regulation of SG dynamics in cells.
- organism: human
- assay: proteomics
- research focus: cell signaling & trafficking
- approach: experimental assay
- approach: statistical model
- Citations
- 0
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Temperature-induced changes in protein interactions control RNA recruitment to G3BP1 condensates
C. M. Fischer, H. Ausserwoger, … T. P. J. Knowles·bioRxiv·Feb 2, 2024
- Caprin-1 binding to the critical stress granule protein G3BP1 is regulated by pH
T. Schulte, M. D. Panas, … G. M. McInerney·bioRxiv·Feb 5, 2021
- Protein-protein interactions with G3BPs drive stress granule condensation and gene expression changes under cellular stress
J. M. Liboy-Lugo, C. A. Espinoza, … S. N. Floor·bioRxiv·Feb 6, 2024
- Dynamically arrested condensate fusion creates complex structures with varying material properties
Nadia A. Erkamp, Ignacio Sanchez‐Burgos, … Tuomas P. J. Knowles·bioRxiv·Nov 15, 2024
- Protein structural transitions critically transform the network connectivity and viscoelasticity of RNA-binding protein condensates but RNA can prevent it
A. R. Tejedor, I. Sanchez-Burgos, … J. R. Espinosa·bioRxiv·Mar 30, 2022
- Solution architecture of G3BP1 reveals pH-dependent conformational switching underlying liquid-liquid phase separation
Xiao Yan Han, Renhua Sun, … Adnane Achour·bioRxiv·Mar 27, 2025