bioRxivCancer BiologyPreprint
Slow TCA flux implies low ATP production in tumors
C. R. Bartman, Y. Shen, W. D. Lee, T. TeSlaa, C. S. R. Jankowski, L. Wang, L. Yang, A. Roichman, V. Bhatt, T. Lan, Z. S. Hu, X. Xing, W. Lu, J. Y. Guo, J. D. Rabinowitz
Abstract
The tricarboxylic acid (TCA) cycle oxidizes carbon substrates to carbon dioxide, with the resulting high energy electrons fed into the electron transport chain to produce ATP by oxidative phosphorylation. Healthy tissues derive most of their ATP from oxidative metabolism, and the remainder from glycolysis. The corresponding balance in tumors remains unclear. Tumors upregulate aerobic glycolysis (the Warburg effect), yet they also typically require an intact TCA cycle and electron transport chain1-6. Recent studies have measured which nutrients contribute carbon to the tumor TCA metabolites7,8, but not tumor TCA flux: how fast the cycle turns. Here, we develop and validate an in vivo dynamic isotope tracing-mass spectrometry strategy for TCA flux quantitation, which we apply to all major mouse organs and to five tumor models. We show that, compared to the tissue of origin, tumor TCA flux is markedly suppressed. Complementary glycolytic flux measurements confirm tumor glycolysis acceleration, but the majority of tumor ATP is nevertheless made aerobically, and total tumor ATP production is suppressed compared to healthy tissues. In murine pancreatic cancer, this is accommodated by downregulation of the major energy-using pathway in the healthy exocrine pancreas, protein synthesis. Thus, instead of being hypermetabolic as commonly assumed, tumors apparently make ATP at a lower than normal rate. We propose that, as cells de-differentiate into cancer, they eschew ATP-intensive processes characteristic of the host tissue, and that the resulting suppressed ATP demand contributes to the Warburg effect and facilitates cancer growth in the nutrient-poor tumor microenvironment.
- organism: mouse
- assay: metabolomics
- research focus: metabolism & bioenergetics
- approach: experimental assay
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Metabolic flux and flux balance analyses indicate the relevance of metabolic thermogenesis and aerobic glycolysis in cancer cells
N. Okahashi, T. Shima, … F. Matsuda·bioRxiv·Nov 16, 2021
- Reversible Dissociation of Mitochondrial Complex V Balances Anabolic and Energy-Generating Needs in Cancer
Huabo Wang, Jie Lu, … Edward V. Prochownik·iSciencePeer-reviewed·Feb 3, 2026
- Capacity-Contribution Paradox: Fatty Acid Oxidation Compensates for Low Glucose-Derived Acetyl-CoA in Cancer.
N. T. Santiappillai, X. C. Kong, … A. J. Hoy·bioRxiv·Mar 25, 2024
- Flux estimation analysis systematically characterizes the metabolic shifts of the central metabolism pathway in human cancer.
Grace Meijuan Yang, Shaoyang Huang, … Chi Zhang·Frontiers in OncologyPeer-reviewed·Jun 12, 2023
- Surface Complex V couples proton gradient across the plasma membrane to ATP production in cancer
Daniel Pelaez, Samantha A. McLaughlin, … J. William Harbour·bioRxiv·May 21, 2026
- Fructose Metabolism Contributes to the Warburg effect