bioRxivBioengineering
Prolonged airway explant culture enables study of health, disease, and viral pathogenesis
R. E. Lee-Ferris, K. Okuda, J. R. Galiger, S. A. Schworer, T. D. Rogers, H. Dang, R. Gilmore, C. Edwards, S. Nakano, A. M. Cawley, R. J. Pickles, S. C. Gallant, E. Crisci, L. Rivier, J. S. Hagood, W. K. O'Neal, R. S. Baric, B. R. Grubb, R. C. Boucher, S. H. Randell
Abstract
In vitro models play a major role in studying airway physiology and disease. However, the native lungs complex tissue architecture and non-epithelial cell lineages are not preserved in these models. Ex vivo tissue models could overcome in vitro limitations, but methods for long-term maintenance of ex vivo tissue has not been established. We describe methods to culture human large airway explants, small airway explants, and precision-cut lung slices for at least 14 days. Human airway explants recapitulate genotype-specific electrophysiology, characteristic epithelial, endothelial, stromal and immune cell populations, and model viral infection after 14 days in culture. These methods also maintain mouse, rabbit, and pig tracheal explants. Notably, intact airway tissue can be cryopreserved, thawed, and used to generate explants with recovery of function 14 days post-thaw. These studies highlight the broad applications of airway tissue explants and their use as translational intermediates between in vitro and in vivo studies.
- organism: human
- organism: mouse
- organism: rat
- assay: imaging
- research focus: cell type annotation
- research focus: differential expression
- research focus: variant calling
- approach: experimental assay
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Long-term expanding human airway organoids for disease modelling.
N. Sachs, D. D. Zomer-van Ommen, … H. Clevers·bioRxiv·May 9, 2018
- A rapid agarose-free protocol for preparing human organotypic lung cultures to study respiratory virus infection and evaluate antivirals ex vivo
Lola Canus, Florentine Jacolin, … Cyrille Mathieu·bioRxiv·Feb 13, 2026
- Collagen Tubular Airway-on-Chip for Extended Epithelial Culture andInvestigation of Ventilation Dynamics
W. Gao, K. R. Kanagarajah, … A. Guenther·bioRxiv·Oct 5, 2023
- A novel in vitro tubular model to recapitulate features of distal airways: The bronchioid
- Protocol for primary human lung organoid-derived air-liquid interface in vitro model to study response to SARS-CoV-2
D. C. Castaneda, S. Jangra, … K. Palucka·bioRxiv·Sep 10, 2023
- Immortalization of human nasal and bronchial airway epithelial cells for genome editing applications
Emma J. van Grinsven, Georgia N. Ithakisiou, … Anna S. Akhmanova·bioRxiv·Nov 30, 2025