bioRxivCancer BiologyPreprint
Cancer-associated recurrent mutations in RNase III domains of DICER1
Bülent Arman AksoyiD, Anders Jacobsen, Robert J. Fieldhouse, William Lee, Emek DemiriD, Giovanni Ciriello, Nikolaus SchultziD, Debora S. MarksiD, Chris SanderiD
Abstract
Mutations in the RNase IIIb domain of DICER1 are known to disrupt processing of 5p-strand pre-miRNAs and these mutations have previously been associated with cancer. Using data from the Cancer Genome Atlas project, we show that these mutations are recurrent across four cancer types and that a previously uncharacterized recurrent mutation in the adjacent RNase IIIa domain also disrupts 5p-strand miRNA processing. Analysis of the downstream effects of the resulting imbalance 5p/3p shows a statistically significant effect on the expression of mRNAs targeted by major conserved miRNA families. In summary, these mutations in DICER1 lead to an imbalance in miRNA strands, which has an effect on mRNA transcript levels that appear to contribute to the oncogenesis.
- organism: human
- assay: bulk RNA-seq
- research focus: cancer & tumor microenvironment
- research focus: gene regulatory network inference
- research focus: differential expression
- approach: statistical model
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