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Cell BiologybioRxiv
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Germ Granule Remodeling Reveals Germline Age in Caenorhabditis elegans

Purbasha DasguptaiD, Ryan J LeeiD, Erica DinneeniD, Carlos Giovanni Silva-GarcíaiD

Abstract

Germline aging limits reproductive lifespan, yet quantitative measures of germline age at cellular resolution within intact tissue remain limited. Here, we show that two germline condensates, P granules and Mutator foci, undergo systematic age-associated remodeling in Caenorhabditis elegans, changing in morphology, spatial organization, and mutual associations. From these single-nucleus features, we develop Germ Granule Clock (GG-Clock), an image-based aging clock that accurately predicts chronological age. Intermittent fasting, a pro-longevity intervention, shifts GG-Clock predictions toward a younger germline state, demonstrating the clock's responsiveness to anti-aging interventions. To make the approach broadly usable, we introduce GGProfiler, an open-source tool that automates granule segmentation and feature extraction. Together, our findings establish germ granule architecture as an interpretable, image-based readout of germline aging and provide a platform for quantifying condensate remodeling across genetic and environmental interventions, with potential translation to other systems.

PDFDOI

02 /Specification & Classification

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