Deciphering the altered conformational states of bifunctional thaumarchaeal crotonyl-CoA hydratase and 3-hydroxypropionyl-CoA dehydratase from Nitrosopumilus maritimus
Ebru DestaniD, Jungmin KangiD, Takehiko ToshaiD, Makina YabashiiD, İlkin YapiciiD, Bradley B. TolariD, Cahine KulakmaniD, Zeliş NergiziD, Hiroaki MatsuuraiD, Yoshiaki KawanoiD, Samuel DeutschiD, Yasuo YoshikuniiD, Christopher A. FrancisiD, Soichi Wakatsuki AiD, Hasan DeMi̇rci̇iD
Abstract
The thaumarchaeal 3-hydroxypropionate/4-hydroxybutyrate (3HP/4HB) cycle represents one of the most efficient mechanisms for CO2 fixation discovered to date. Within this cycle, the enzyme encoded by Nmar_1308 from Nitrosopumilus maritimus SCM1 plays a crucial role due to its dual functionality as both a crotonyl-CoA hydratase (CCAH) and a 3-hydroxypropionyl-CoA dehydratase (3HPD). Although the importance of a bifunctional enzyme for lowering the cost of biosynthesis, the details of structural dynamics are still missing. Here, in addition to our cryogenic temperature structures, we determined the first ambient temperature structures of the Nmar_1308 protein by Serial Femtosecond X-ray Crystallography (SFX). The determined structures capture previously unobserved conformational dynamics of the Nmar_1308 protein, providing invaluable information for future synthetic biology applications.
02 /Specification & Classification
Click any tag to browse matching papers- Citations
- 0
- Assay
- Research Focus
- Approach
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- Structural Insights into Bifunctional Thaumarchaeal Crotonyl-CoA Hydratase and 3-Hydroxypropionyl-CoA Dehydratase from Nitrosopumilus maritimus
E. Destan, B. Yuksel, … H. DeMirci·bioRxiv·Sep 22, 2021
- Crystal Structure of 3-Hydroxypropionyl-CoA Synthetase (ADP-forming) from Nitrosopumilus maritimus
J Austin Johnson, Bilge Tosun, … Hasan DeMi̇rci̇·Current Research in Structural BiologyPeer-reviewed·Mar 17, 2026
- Crystal Structure of the 4-Hydroxybutyryl-CoA Synthetase (ADP-forming) from Nitrosopumilus maritimus
J. A. Johnson, B. B. Tolar, … H. Demirci·bioRxiv·Jul 14, 2023
- Structural Analysis of Wild-type and Val120Thr Mutant Candida boidinii Formate Dehydrogenase by X-ray Crystallography
M. Gul, B. Yuksel, … H. DeMirci·bioRxiv·Dec 25, 2022
- Structural adaptation of oxygen tolerance in 4-hydroxybutyrl-CoA dehydratase, a key enzyme of archaeal carbon fixation
H. DeMirci, B. Tolar, … S. Wakatsuki·bioRxiv·Feb 5, 2020
- Imaging active site chemistry and protonation states: NMR crystallography of the tryptophan synthase α-aminoacrylate intermediate
J. B. Holmes, V. Liu, … L. J. Mueller·Proceedings of the National Academy of SciencesPeer-reviewed·Jan 7, 2022