bioRxivBiophysics
Specific Eph Receptor-Cytoplasmic Effector Signaling Mediated by SAM-SAM Domain Interactions
M. Zhang, Y. Wang, Y. Shang, J. Li, W. Chen, G. Li, J. Wan, W. Liu
Abstract
The Eph receptor tyrosine kinase (RTK) family is the largest subfamily of RTKs playing critical roles in many developmental processes such as tissue patterning, neurogenesis and neuronal circuit formation, angiogenesis, etc. How the 14 Eph proteins, via their highly similar cytoplasmic domains, can transmit diverse and sometimes opposite cellular signals upon engaging ephrins is a major unresolved question. Here we systematically investigated the bindings of each SAM domain of Eph receptors to the SAM domains from SHIP2 and Odin, and uncover a highly specific SAM-SAM interaction-mediated cytoplasmic Eph-effector binding pattern. Comparative X-ray crystallographic studies of several SAM-SAM heterodimer complexes, together with biochemical and cell biology experiments, not only revealed the exquisite specificity code governing Eph/effector interactions but also allowed us to identify SAMD5 as a new Eph binding partner. Finally, these Eph/effector SAM heterodimer structures can explain numerous Eph SAM mutations identified in patients suffering from cancers and other diseases.
Reproducibility ledger
Nobody has reported trying to reproduce this paper yet. Did you replicate an experiment or run the code? Your report saves the next lab a week.
Sign in to file a reproducibility report.
Related papers
- The SAM Domain of EphA2 Inhibits Ligand-Independent Clustering and Activation
X. Shi, R. Lingerak, … A. W. Smith·bioRxiv·Oct 5, 2023
- Tyrosine phosphorylation and the inhibitory C-terminal SAM domain moderately affect transient interactions in a EphA2 cytoplasmic fragment in solution: A combined experimental and molecular modeling study.
Pravesh Shrestha, Amita Rani Sahoo, … Matthias Buck·bioRxiv·Sep 29, 2025
- EPH tyrosine kinase receptors regulate epithelial morphogenesis and phosphorylate the PAR-3 scaffold protein to modulate downstream signaling networks
Sara L. Banerjee, Noémie Lavoie, … Nicolas Bisson·bioRxiv·Sep 6, 2020
- Allosteric Regulation of the EphA2 Receptor Intracellular Region by Serine/Threonine Kinases
B. C. Lechtenberg, M. P. Gehring, … E. B. Pasquale·bioRxiv·Jan 28, 2021
- EphA2 and Ephrin-A1 Use the Same Interface for Both in cis and in trans Interactions That Regulate Distinct Cell Signaling and Function
Soyeon Kim, Paul D. Toth, … Bingcheng Wang·bioRxiv·Jul 31, 2025
- Molecular Determinants of Receptor-Specific Membrane Interactions in EphA1 and EphA2 from Coarse-Grained Simulations
Amita Rani Sahoo, Nisha Bhattarai, Matthias Buck·Journal of Chemical Information and ModelingPeer-reviewed·Aug 28, 2026