Genetic and Environmental Crop Studies

Genotypic and environmental effects on seed coat patterning and nutritional composition in common bean (Phaseolus vulgaris L.)

This study examines how genotype and environment affect seed coat patterns and nutritional content in common bean, finding significant environmental impacts on macronutrients and associations between seed coat pigmentation and mineral concentrations.

Population structure and diversity of common bean (Phaseolus vulgaris L.) landraces in the Peruvian Amazon

The paper analyzes genetic diversity in Peruvian Amazon common bean landraces, identifying two major genetic groups and highlighting their value for breeding programs.

Uncovering Superior Alleles and Genetic Loci for Yield-Related Traits in Mungbean (Vigna radiata L. Wilczek) Through Genome-Wide Association Study

This study identifies 16 genetic loci associated with yield-related traits in mungbean using GWAS and evaluates superior germplasm for marker-assisted breeding.

A new genome assembly of the pea cultivar Cameor provides resources for functional genomics and genetics

The paper presents an improved pea genome assembly using long-read sequencing and other techniques, resulting in a highly contiguous and complete genome resource.

Defining the Growth Stages of Mungbean (Vigna radiata L.) using the BBCH Scale

This paper defines the growth stages of mungbean using the BBCH scale, providing a standardized tool for crop management and simulation models.

Mapping Fusarium Wilt and Sterility Mosaic Disease Resistance-Associated Genomic Regions and Haplotype Variants in Pigeonpea

This study identifies genomic regions and haplotypes associated with resistance to fusarium wilt and sterility mosaic disease in pigeonpea using GWAS and KASP validation.

A vertical stacking approach to rapid generation cycling for indoor growth of tall annual crops - the case of Vicia faba

This paper introduces a vertical stacking protocol for rapid generation cycling in faba bean, achieving 4.1-5.7 generations per year while reducing plant height and enabling year-round breeding.

Cultivar- and field site-specific protein and metabolite patterns of faba bean (Vicia faba L.) seeds

This study compares protein and metabolite patterns in faba bean seeds across cultivars and field sites, finding cultivar-specific variations and field site influences on sulfur content.

Dissecting genomic regions and candidate genes for pod borer resistance and component traits in pigeonpea minicore collection

This study identifies significant marker-trait associations and candidate genes for pod borer resistance and related traits in pigeonpea using GWAS and field evaluations.

Biocultural vulnerability of traditional crops in the Indian Trans Himalaya

The paper examines the ecological and genetic resilience of traditional crops in the Indian Trans Himalaya, finding they are better adapted to local conditions and have greater genetic diversity than introduced crops.

InDels in an intronic region of gene Ccsmd04 coding for dormancy/auxin-associated protein controls sterility mosaic disease resistance in pigeonpea

The paper identifies InDels in the Ccsmd04 gene associated with sterility mosaic disease resistance in pigeonpea using QTL-seq and validates them as diagnostic markers.

QTL combinations associated with field partial resistance to aphanomyces root rot in pea Near-Isogenic Lines

VC2 regulates baseline vicine content in faba bean

The paper identifies VC2 as a gene responsible for residual vicine content in low v-c faba bean cultivars, showing its role in the biosynthetic pathway and potential for marker-assisted breeding.

Identification of significant genome-wide associations and QTL underlying variation in seed protein composition in pea (Pisum sativum L.)

This study identifies genetic loci associated with seed protein composition in pea using GWAS and QTL mapping, revealing overlapping regions and candidate genes involved in protein biosynthesis and modification.

Evaluating the breeding potential of cultivated lentils for increasing protein and amino acid concentration in the Northern Great Plains

The paper evaluates protein and amino acid concentration in lentils using NIRS and genome-wide association analyses to identify markers for breeding improvements.

Genomic and Genetic Insights into Mendel's Pea Genes

This study identifies genetic variants underlying seven Mendelian traits in pea, revealing new alleles and gene mutations for traits previously poorly understood.

Varietal screening of newly developed blackgram genotypes against Cercospora Leaf Spot (Cercospora canescens) in the Terai region of Nepal.

The paper screens 12 blackgram genotypes for resistance to Cercospora Leaf Spot, finding significant differences in disease severity and yield.

Telomere-to-telomere, gap-free genome of mung beans (Vigna radiata) provides insights into domestication under structural variation

The paper presents a gap-free genome assembly of mung beans and identifies structural variations and selection pressures during domestication.

Linking phenology, harvest index and genetics to improve chickpea grain yield

This study links phenology, harvest index, and genetics in chickpea to improve grain yield by analyzing 24 genotypes across 12 environments.

afila, the origin and nature of a major innovation in the history of pea breeding

The paper identifies the molecular basis of the afila mutation in pea, showing it results from the deletion of two zinc finger transcription factors and reveals haplotype diversity at the af locus.

A reference assembly for the legume cover crop, hairy vetch (Vicia villosa)

The paper presents a reference genome assembly for hairy vetch (Vicia villosa) to aid in genetic improvement and genome evolution studies.

SNP discovery by exome capture and resequencing in a pea genetic resource collection

The paper discovers SNPs in a pea germplasm collection using exome capture and resequencing to support genome-wide association studies.

Genetic analysis of global faba bean germplasm maps agronomic traits and identifies strong selection signatures for geographical origin

This study maps agronomic trait genetics and identifies selection signatures in faba bean germplasm using genome-wide association studies and population structure analysis.

Chromosome-scale assembly of the lablab genome - A model for inclusive orphan crop genomics

The paper presents a chromosome-scale genome assembly of Lablab purpureus, a neglected crop, and reports on its domestication history and genetic diversity, offering a model for inclusive orphan crop genomics.

Selection and adaptive introgression guided the complex evolutionary history of the European common bean

The paper traces the evolutionary history of European common beans, showing Andean origins and adaptive introgression shaping their genomic diversity.

Identification of the gene coding for seed cotyledon albumin SCA in the pea (Pisum L.) genome

The paper identifies the gene encoding the seed cotyledon albumin SCA in pea and develops a CAPS marker for genetic and phylogeographical studies.

Genomic regions associated with chocolate spot (Botrytis fabae Sard.) resistance in fababean (Vicia faba L.)

This study identifies genomic regions associated with chocolate spot resistance in faba bean using QTL analysis, providing targets for marker-assisted breeding.

Genetic analysis of early phenology in lentil identifies distinct loci controlling component traits

The paper identifies two loci, DTF6a and DTF6b, that control early flowering in lentil, with DTF6a being sufficient for early flowering even in short photoperiods.

Chromosome-level assembly of the common vetch reference genome (Vicia sativa)

The paper presents a chromosome-level reference genome for Vicia sativa using long-read and short-read sequencing along with Hi-C data, resulting in a high-quality assembly with 58,415 annotated genes.

Genetic Basis for Lentil Adaptation to Summer Cropping in Northern Temperate Environments

This study identifies QTLs for key phenological traits in lentil, providing markers for marker-assisted selection to improve adaptation to temperate environments.