A. Gupta

The ancestral population size conditioned on the reconstructed phylogenetic tree with occurrence data

The paper derives the conditional probability distribution of ancestral population size given a reconstructed phylogenetic tree and occurrence data, with applications in epidemiology and macroevolution.

The probability distribution of the reconstructed phylogenetic tree with occurrence data

The paper derives a probability distribution for phylogenetic trees with occurrence data, enabling parameter estimation in epidemiology and macroevolution.

Long acyl chain ceramides govern cholesterol and cytoskeleton dependence of membrane outer leaflet dynamics

The paper investigates how long acyl chain ceramides affect membrane outer leaflet dynamics in different cell types by analyzing cholesterol and cytoskeleton interactions.

Caenorhabditis elegans sensory neurons modulate pathogen specific responses via HLH-30/TFEB transcription factor and FSHR-1 GPCR axes of immunity

This study shows that sensory neurons in C. elegans use OSM-6 and FSHR-1 to modulate pathogen-specific immune responses to Gram-positive and Gram-negative bacteria.

Serum proteomic approach for differentiation of frail and non-frail elderly

This study identifies serum protein biomarkers that differentiate frail from non-frail elderly using proteomic analysis.

Nuclear hormone receptor NHR-49 shapes immuno-metabolic response of Caenorhabditis elegans to Enterococcus faecalis infection.

This study shows that NHR-49 in C. elegans regulates lipid metabolism and immune responses to E. faecalis infection, linking lipid droplet homeostasis to survival.

A cellular automaton for modeling non-trivial biomembrane ruptures

This paper introduces a cellular automaton model to simulate biomembrane ruptures, showing it can replicate complex rupture patterns and reveal the role of inter-layer adhesion.

Higher order assembling of the mycobacterial essential polar growth factor DivIVA/Wag31

The paper investigates the structural organization of mycobacterial Wag31, showing phospho-mimetic and phospho-ablative variants form different polymer structures relevant to polar scaffold formation.

Genome-scale metabolic reconstruction and metabolic versatility of an obligate methanotroph Methylococcus capsulatus str. Bath

This paper reconstructs a genome-scale metabolic model for Methylococcus capsulatus str. Bath and identifies key metabolic pathways and essential genes.

Correlation of in vitro susceptibility based on MICs and SQLE mutations with clinical response to terbinafine in patients with tinea corporis/cruris

This study correlates in vitro susceptibility (MICs) and SQLE mutations with clinical response to terbinafine in tinea corporis/cruris patients, finding higher MICs and SQLE mutations associated with poorer outcomes.

Phosphatidylinositol 4,5-bisphosphate regulates cilium transition zone maturation in Drosophila melanogaster

The paper shows that PIP2 and Skittles are required for normal ciliary transition zone morphology and function in Drosophila male germline.

Infectivity of dengue virus serotypes 1 and 2 is correlated to E protein intrinsic dynamics but not to envelope conformations

This study investigates the relationship between dengue virus serotypes 1 and 2 infectivity and the dynamics of their envelope proteins, finding that intrinsic dynamics, not envelope conformations, correlate with infectivity.