Author

Alex Pan

St. Mark's School of Texas

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Developmental Biology· 1 Neuroscience· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:benchmarking· 1 Assay:bulk RNA-seq· 1 Research Focus:cell type annotation· 1 Research Focus:cell-cell communication· 1 Assay:ChIP-seq· 1 Assay:DNA methylation· 1 Approach:experimental assay· 1

Frequent Co-Authors

Alice MazzagattiiD· 1 shared Altan M. TurkogluiD· 1 shared Carlos A. Pinzón-ArteagaiD· 1 shared Daniel A. SchmitziD· 1 shared Elizabeth D. KirbyiD· 1 shared Emily B. BallardiD· 1 shared Jiyeon K. DenningeriD· 1 shared Jun WuiD· 1 shared

Activity by Year

2022-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 21 mutual co-author links

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1 shared paperDevelopmental Biology

Alice MazzagattiORCID

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2 papers

Recent·Most cited

TASOR expression in naive embryonic stem cells safeguards their developmental potential

Carlos A. Pinzón-Arteaga, Ryan A. O’Hara, Alice Mazzagatti, Emily B. Ballard, Yingying Hu, Alex Pan, Daniel A. Schmitz, Yulei Wei, Masahiro Sakurai, Peter Ly, Laura A. Banaszynski, Jun Wu

This study identifies TASOR's role in maintaining developmental potential during the transition from naive to primed pluripotency by preventing L1 transposable element activation and subsequent cell death.

Cell Reports · Oct 24, 2024Peer-reviewedDevelopmental Biology

Robust transcriptional profiling and identification of differentially expressed genes with low input RNA sequencing of adult hippocampal neural stem and progenitor populations

Jiyeon K. Denninger, Logan A. Walker, Xi Xian Chen, Altan M. Turkoglu, Alex Pan, Zoe M. Tapp, Sakthi Senthilvelan, Raina Rindani, Olga N. Kokiko‐Cochran, Ralf A. Bundschuh, Pearlly S. Yan, Elizabeth D. Kirby

This study compares bulk and single-cell RNAseq for identifying differentially expressed genes in adult hippocampal NSCs, finding single-cell methods miss high-fold-change genes but can be optimized for in vivo use.

Frontiers in Molecular Neuroscience · Jan 31, 2022Peer-reviewedNeuroscience