Author

D. Y. Kim

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Microbiology· 2 Biochemistry· 1 Cell Biology· 1 Immunology· 1 Physiology· 1 Plant Biology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 6 Organism:mouse· 4 Research Focus:cell type annotation· 3 Research Focus:host-pathogen & immune response· 3 Assay:bulk RNA-seq· 2 Assay:proteomics· 2 Organism:Arabidopsis· 1 Organism:bacteria (other)· 1

Frequent Co-Authors

A. Gerold· 1 shared A. J. Nirmal· 1 shared A. K. Dewan· 1 shared A.-T. N. Bui· 1 shared B. Aliya· 1 shared C. G. Lian· 1 shared C. Zhang· 1 shared D. A. Choi· 1 shared

Activity by Year

2018-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 8 mutual co-author links

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1 shared paperPhysiology

A. Gerold

Mutual co-authors in cluster

Author profile →

7 papers

Recent·Most cited

An exploration of mechanisms underlying Desemzia incerta colonization resistance to methicillin-resistant Staphylococcus aureus on the skin

M. Wei, S. A. B. Knight, H. Fazelinia, L. Spruce, J. Roof, E. W. Chu, J. Walsh, L. Flowers, D. Y. Kim, J. Zhu, E. A. Grice

This study identifies Desemzia incerta as a skin commensal that reduces MRSA colonization through secreted antimicrobial proteins and decreased biofilm formation in a murine model.

bioRxiv · Oct 11, 2023 · PreprintMicrobiology

Immune Profiling of Dermatologic Adverse Events from Checkpoint Blockade using Tissue Cyclic Immunofluorescence

Z. Maliga, D. Y. Kim, A.-T. N. Bui, J.-R. Lin, A. K. Dewan, G. F. Murphy, A. J. Nirmal, C. G. Lian, P. K. Sorger, N. R. LeBoeuf

This study compares CyCIF and IHC for immune profiling in ICI-induced dAEs, finding CyCIF provides more detailed single-cell characterization of immune infiltrates.

bioRxiv · Apr 3, 2023 · PreprintImmunology

Zika virus infection induces IL-1β-mediated inflammatory responses by macrophages in the brain of an adult mouse model

G. U. Jeong, S. Lee, D. Y. Kim, J. Lyu, G. Y. Yoon, J. Ko, Y.-C. Kwon

This study investigates ZIKV-induced neuroinflammation in adult mice, finding that macrophage IL-1β expression and complement activation contribute to neuroinflammatory damage.

bioRxiv · Jan 5, 2023 · PreprintMicrobiology

Crystal structure and biochemical analysis suggest that YjoB ATPase is a substrate-specific molecular chaperone

E. Kwon, P. Dahal, D. Y. Kim

The paper reports the crystal structure and biochemical analysis of YjoB, showing it prevents aggregation of specific substrates and functions as a molecular chaperone in Bacillus subtilis.

bioRxiv · May 6, 2022 · PreprintBiochemistry

Role of Gasdermins in the Biogenesis of Apoptotic Cell-Derived Exosomes

J. Hur, Y. J. Kim, D. A. Choi, D. W. Kang, J. Kim, H. S. Yoo, S. A. Shahriyar, T. Mustajab, D. Y. Kim, Y.-J. Chwae

This study identifies gasdermin-mediated mechanisms in apoptotic exosome biogenesis and shows their role in tumor-induced inflammation.

bioRxiv · Apr 27, 2021Cell Biology

Ubiquitylome Analysis Reveals a Central Role for the Ubiquitin-Proteasome System in Plant Innate Immunity

L. Shan, X. Ma, C. Zhang, D. Y. Kim, Y. Huang, P. He, R. D. Vierstra

The paper identifies ubiquitylated proteins in Arabidopsis during MAMP-triggered immunity, revealing the ubiquitin-proteasome system's role in immune regulation.

bioRxiv · Sep 15, 2020Plant Biology

Critical Limb Ischemia Induces Remodeling of Skeletal Muscle Motor Unit and Myonuclear- and Mitochondrial-Domains

M. Mohiuddin, N. H. Lee, J. Y. Moon, W. M. Han, S. E. Anderson, J. J. Choi, S. Nakhai, T. Tran, B. Aliya, D. Y. Kim, A. Gerold, L. Hansen, W. R. Taylor, Y. C. Jang

This study investigates how critical limb ischemia affects skeletal muscle by increasing myonuclear number and mitochondrial content per myonucleus in mice.

bioRxiv · Sep 25, 2018Physiology