Author

E. Sakata

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 2 Biophysics· 1

Signature Assays, Organisms & Methods

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Research Focus:protein folding & dynamics· 3 Research Focus:chromatin & epigenetic regulation· 2 Approach:experimental assay· 2 Approach:statistical model· 2 Assay:structural biology· 2 Approach:biophysical modeling· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:cell-cell communication· 1

Frequent Co-Authors

M. R. Eisele· 2 shared A. Schuetz· 1 shared B.-H. Lee· 1 shared C. Sailer· 1 shared D. Finley· 1 shared D. Van Dalen· 1 shared F. Stengel· 1 shared G. Tian· 1 shared

Activity by Year

2021-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 24 mutual co-author links

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2 shared papersBiochemistry

M. R. Eisele

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3 papers

Recent·Most cited

Unravelling ATP processing by the AAA+ protein p97 at the atomic level

M. Shein, M. Hitzenberger, T. Cheng, S. Rout, K. Leitl, Y. Sato, M. Zacharias, E. Sakata, A. Schuetz

This study uses cryo-EM, NMR, and MD simulations to reveal the atomic-level mechanism of ATP processing by p97, identifying a metastable ADP.Pi state and its role in coordinating subunit actions.

bioRxiv · Aug 26, 2023Biophysics

A mono- and intralink filter (mi-filter) to improve false-discovery rates in cross-linking mass spectrometry data

X. Chen, C. Sailer, K.-M. Kammer, J. Fuersch, M. R. Eisele, E. Sakata, F. Stengel

The paper introduces a filter to reduce false-discovery rates in cross-linking mass spectrometry data by requiring monolink or intra-protein crosslinks for inter-protein link validation.

bioRxiv · Feb 3, 2022Biochemistry

Allosteric control of Ubp6 and the proteasome via a bidirectional switch

K. Y. S. Hung, S. Klumpe, M. R. Eisele, S. Elsasser, G. Tian, S. Sun, J. A. Moroco, T. C. Cheng, T. Joshi, T. Seibel, D. Van Dalen, X.-H. Feng, Y. Lu, H. Ovaa, J. R. Engen, , D. Finley

This study identifies an allosteric switch that controls Ubp6 and the proteasome, showing their active states are mutually exclusive.

bioRxiv · Jul 16, 2021Biochemistry