Author

H.-X. Sun

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Plant Biology· 3 Cancer Biology· 1 Cell Biology· 1 Pathology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:cell type annotation· 3 Organism:human· 3 Organism:Arabidopsis· 2 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Assay:scRNA-seq· 2 Research Focus:benchmarking· 1

Frequent Co-Authors

J. Li· 5 shared Y. Gu· 5 shared G. Liu· 3 shared K. Xia· 3 shared L. Liu· 3 shared Z. Chen· 3 shared R. Chen· 2 shared R. Yin· 2 shared

Activity by Year

2020-2023 · peak 2/yr

Co-Author Collaboration Network

10 top collaborators · 40 mutual co-author links

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5 shared papersPlant Biology

J. Li

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

RNA Sensing and Innate Immunity Constitutes a Barrier for Interspecies Chimerism

Y. Hu, H.-X. Sun, M. Sakurai, A. E. Jones, L. Liu, T. Cheng, C. Zheng, J. Li, B. Ravaux, Z. Luo, Y. Ding, T. Liu, Y. Wu, E. Chen, Z. Chen, , J. Wu

This study identifies RNA sensing and innate immunity in host embryos as a barrier to interspecies chimerism and shows that modifying host embryos can enhance human cell survival in chimeric embryos.

bioRxiv · Mar 7, 2023 · PreprintCell Biology

Multi-omics analyses of single cell-derived colorectal cancer organoids reveal intratumor heterogeneity and immune response diversity

J. Yue, J. Li, Q. Xu, Q. Ma, C. Chen, S. Liu, H.-X. Sun, q. Sui, F. Mu, P. Ding, L. Liu, M. Perez-Moreno, X. Zhang

bioRxiv · Nov 25, 2022 · PreprintCancer Biology

Single-cell transcriptome reveals the redifferentiation trajectories of the early stage of de novo shoot regeneration in Arabidopsis thaliana

G. Liu, J. Li, J. Li, Z. Chen, P. Yuan, R. Chen, R. Yin, Z. Liao, X. Li, Y. Gu, H.-X. Sun, K. Xia

The paper uses single-cell transcriptomics to study cell fate transitions during early de novo shoot regeneration in Arabidopsis, identifying redifferentiation trajectories and regulatory factors.

bioRxiv · Jan 1, 2022 · PreprintPlant Biology

Single-cell Stereo-seq enables cell type-specific spatial transcriptome characterization in Arabidopsis leaves

K. Xia, H.-X. Sun, J. Li, J. Li, Y. Zhao, R. Chen, G. Liu, Z. Chen, R. Yin, S. Hao, J. Wang, Q. Xie, J. Xu, Y. Li, A. Chen, , X. Xu

This study introduces scStereo-seq, a method for single-cell spatial transcriptome profiling in Arabidopsis leaves, revealing cell type-specific spatial gene expression gradients and developmental trajectories.

bioRxiv · Oct 20, 2021 · PreprintPlant Biology

Efficient Multiplex Genome Editing Tools Identified by Protoplast Technology in Phalaenopsis

K. Xia, D. Zhang, G. Liu, X. Xu, Y. Yang, G.-Q. Zhang, H.-X. Sun, Y. Gu

This study identifies two efficient multiplex genome editing tools for Phalaenopsis orchids using a protoplast platform, with DPII-Cpf1 showing the highest editing efficiency.

bioRxiv · Sep 29, 2020 · PreprintPlant Biology

Transcriptome analyses of β-thalassemia -28 (A>G) mutation using isogenic cell models generated by CRISPR/Cas9 and asymmetric single-stranded oligodeoxynucleotides (assODN)

J. Li, Z. Zhou, H.-X. Sun, W. Ouyang, G. Dong, T. Liu, L. Ge, X. Zhang, C. Liu, Y. Gu

This study uses CRISPR/Cas9 and assODN to create an isogenic cell model of the HBB -28 (A>G) mutation and analyzes its transcriptome effects, revealing altered gene expression and pathway activation.

bioRxiv · Jun 18, 2020Pathology