Author

J. Banchereau

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Immunology· 6

Signature Assays, Organisms & Methods

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Research Focus:cell type annotation· 6 Research Focus:differential expression· 5 Organism:human· 5 Assay:bulk RNA-seq· 4 Approach:statistical model· 4 Approach:experimental assay· 3 Research Focus:gene regulatory network inference· 2 Assay:ATAC-seq· 1

Frequent Co-Authors

D. Chaussabel· 3 shared K. Palucka· 3 shared L. Chiche· 3 shared V. Pascual· 3 shared A. Mejias· 2 shared A. O'Garra· 2 shared B. A. Kabeer· 2 shared C. Bloom· 2 shared

Activity by Year

2019-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 45 mutual co-author links

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3 shared papersImmunology

D. Chaussabel

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Author profile →

6 papers

Recent·Most cited

Long-term engraftment of adult hematopoietic progenitors in a novel model of humanized mice

C. I. Yu, R. Maser, F. Marches, J. Banchereau, K. Palucka

This paper develops a novel humanized mouse model to improve long-term engraftment of adult hematopoietic progenitor cells and tissue colonization of human myeloid cells.

bioRxiv · Oct 2, 2023 · PreprintImmunology

Single cell analysis of blood mononuclear cells stimulated through CD3 and CD28 shows collateral activation of B and NK cells and demise of monocytes

N. T. Lawlor, D. Nehar-Belaid, J. Grassmann, M. Stoeckius, P. Smibert, M. L. Stitzel, V. Pascual, J. Banchereau, A. Williams, D. Ucar

The paper uses single-cell RNA-seq and CITE-seq to analyze PBMC responses to T-cell and monocyte activators, showing differential activation patterns and transcriptional changes in various immune cell types.

bioRxiv · Dec 23, 2020 · PreprintImmunology

Development and Characterization of a Fixed Repertoire of Blood Transcriptome Modules Based on Co-expression Patterns Across Immunological States

M. C. Altman, D. Rinchai, N. Baldwin, M. Toufiq, E. Whalen, M. Garand, B. A. Kabeer, M. Alfaki, S. Presnell, P. Khaenam, A. A. Benitez, F. Mougin, P. Thebault, L. Chiche, N. Jourde-Chiche, , D. Chaussabel

The paper develops a fixed repertoire of blood transcriptome modules based on co-expression patterns across immunological states to provide a stable framework for analyzing and interpreting blood transcriptome data.

bioRxiv · Apr 28, 2020Immunology

Sexual-dimorphism in human immune system aging

E. J. Marquez, C.-h. Chung, R. Marches, R. J. Rossi, D. Nehar-Belaid, D. J. Mellert, G. A. Kuchel, J. Banchereau, D. Ucar

The paper examines sex differences in immune system aging using ATAC-seq, RNA-seq, and flow-cytometry on peripheral blood mononuclear cells from 172 adults, revealing sex-specific epigenomic and functional changes with aging.

bioRxiv · Feb 7, 2020Immunology

A Transcriptome Fingerprinting Assay for Clinical Immune Monitoring

M. C. Altman, N. Baldwin, E. Whalen, T. Al-Shaikhly, S. Presnell, P. Khaenam, V. H. Gersuk, L. Chiche, N. Jourde-Chiche, T. Phillips, G. Klintmalm, A. O'Garra, M. Berry, C. Bloom, R. J. Wilkinson, , D. Chaussabel

The paper develops a targeted transcriptome fingerprinting assay using modular transcriptional repertoires to assess immune functions in clinical settings.

bioRxiv · Mar 24, 2019 · PreprintImmunology

Elevation of FAM129A in neutrophils exposed to serum of patients with severe sepsis: in silico investigations during a hands on training workshop and follow on validation of protein expression in neutrophils

J. Roelands, L. Chiche, R. Marches, M. Toufiq, B. A. Kabeer, M. A. I. Alfaki, M. Saadaoui, A. P. Lakshmanan, D. K. Bangarusamy, S. Murugesan, D. Bedognetti, W. Hendrickx, S. A. Khodor, A. Terranegra, J. Banchereau, , D. Rinchai

The paper investigates FAM129A expression in neutrophils exposed to sepsis serum using transcriptome data and confirms surface expression through bench validation.

bioRxiv · Jan 25, 2019 · PreprintImmunology