Author

J. Barasch

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Cell Biology· 2 Physiology· 1

Signature Assays, Organisms & Methods

Click to filter · or open tag

Research Focus:cell type annotation· 3 Organism:mouse· 3 Approach:deep learning· 2 Assay:scRNA-seq· 2 Approach:statistical model· 2 Research Focus:cell-cell communication· 1 Research Focus:clustering· 1 Research Focus:differential expression· 1

Frequent Co-Authors

T. Shen· 2 shared A. Babu· 1 shared A. Kondo· 1 shared B. Chelgren· 1 shared B. Mueller· 1 shared C. A. O'Driscoll· 1 shared C. M. Vezina· 1 shared C. Qiu· 1 shared

Activity by Year

2017-2022 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 19 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersCell Biology

T. Shen

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Temporal and spatial staging of lung alveolar regeneration is determined by the grainyhead transcription factor Tfcp2l1

F. L. Cardenas-Diaz, D. C. Liberti, J. P. Leach, A. Babu, J. Barasch, T. Shen, M. A. Diaz-Miranda, S. Zhou, Y. Ying, M. P. Morley, E. E. Morrisey

This study identifies Tfcp2l1 as a regulator of lung alveolar regeneration, balancing AT2 cell self-renewal and differentiation through spatial and temporal control.

bioRxiv · Aug 23, 2022Cell Biology

A Uropathogenic E. coli UTI89 model of prostatic inflammation and collagen accumulation for use in studying aberrant collagen production in the prostate

H. M. RUETTEN, J. Sandhu, B. Mueller, P. Wang, H. L. Zhang, K. A. Wegner, M. Cadena, S. Sandhu, L. Abler, J. Zhu, C. A. O'Driscoll, B. Chelgren, Z. Wang, T. Shen, J. Barasch, , C. M. Vezina

This paper develops a mouse model of prostatic inflammation and collagen accumulation using E. coli UTI89 instillations to study aberrant collagen production in the prostate.

bioRxiv · Aug 10, 2020Physiology

Comprehensive single cell RNAseq analysis of the kidney reveals novel cell types and unexpected cell plasticity

J. Park, R. Shrestha, C. Qiu, A. Kondo, S. Huang, M. Werth, M. Li, J. Barasch, K. Susztak

The paper uses single-cell RNA sequencing to identify novel kidney cell types and Notch-mediated plasticity in collecting duct cells, which is defective in chronic kidney disease.

bioRxiv · Oct 13, 2017Cell Biology