Author

A. Kondo

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Bioengineering· 2 Plant Biology· 2 Cell Biology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 4 Research Focus:metabolism & bioenergetics· 4 Assay:metabolomics· 4 Approach:statistical model· 3 Research Focus:cell type annotation· 2 Approach:deep learning· 2 Organism:C. elegans· 1 Assay:CRISPR screen· 1

Frequent Co-Authors

T. Hasunuma· 3 shared K. Tanaka· 2 shared T. Shirai· 2 shared A. Romani· 1 shared B. Johansson· 1 shared C. J. Vavricka· 1 shared C. Qiu· 1 shared D. K. Summers· 1 shared

Activity by Year

2016-2023 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 12 mutual co-author links

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3 shared papersPlant Biology

T. Hasunuma

Mutual co-authors in cluster

Author profile →

6 papers

Recent·Most cited

Minimized dark cataplerosis of the Calvin cycle ensures prompt photosynthetic initiation in cyanobacteria

K. Tanaka, A. Kondo, T. Hasunuma

The paper shows that low activity of PEP-converting enzymes during darkness maintains glycolytic intermediate levels, facilitating photosynthetic initiation in cyanobacteria.

bioRxiv · Oct 18, 2023 · PreprintPlant Biology

Dark accumulation of downstream glycolytic intermediates confers robust initiation of photosynthesis in cyanobacteria

K. Tanaka, T. Shirai, C. J. Vavricka, M. Matsuda, A. Kondo, T. Hasunuma

The paper shows that accumulation of glycolytic intermediates in the dark enables rapid initiation of photosynthesis in cyanobacteria.

bioRxiv · Apr 4, 2022 · PreprintPlant Biology

Consolidated bioprocessing of corn cob-derived hemicellulose: engineered industrial Saccharomyces cerevisiae as efficient whole cell biocatalysts

J. T. Cunha, A. Romani, K. Inokuma, B. Johansson, T. Hasunuma, A. Kondo, L. Domingues

This paper evaluates industrial Saccharomyces cerevisiae strains for consolidated bioprocessing of corn cob-derived hemicellulose, achieving high ethanol yields without external hydrolytic catalysts.

bioRxiv · Jul 1, 2020Bioengineering

A single CRISPR base editor to induce simultaneous C-to-T and A-to-G mutations

R. C. Sakata, S. Ishiguro, H. Mori, M. Tanaka, M. Seki, N. Masuyama, K. Nishida, H. Nishimasu, A. Kondo, O. Nureki, M. Tomita, H. Aburatani, N. Yachie

This paper introduces Target-ACE, a CRISPR base editor that induces both C-to-T and A-to-G mutations, showing higher efficiency than using separate editors.

bioRxiv · Aug 8, 2019 · PreprintBioengineering

Comprehensive single cell RNAseq analysis of the kidney reveals novel cell types and unexpected cell plasticity

J. Park, R. Shrestha, C. Qiu, A. Kondo, S. Huang, M. Werth, M. Li, J. Barasch, K. Susztak

The paper uses single-cell RNA sequencing to identify novel kidney cell types and Notch-mediated plasticity in collecting duct cells, which is defective in chronic kidney disease.

bioRxiv · Oct 13, 2017Cell Biology

Metabolomic and proteomic analyses of a quiescent Escherichia coli cell factory reveal the mechanisms behind its production efficiency

N. M. Thomson, T. Shirai, M. Chiapello, A. Kondo, K. J. Mukherjee, E. Sivaniah, D. K. Summers, K. Numata

The paper investigates quiescent Escherichia coli cultures to reveal how indole-induced quiescence enhances metabolite production efficiency.

bioRxiv · Oct 20, 2016Microbiology