J. Carter

How to barcode (almost all) freshwater biodiversity

This study identifies cost-effective primer pairs and develops a tool to enhance eDNA-based monitoring of freshwater biodiversity.

Prediction of pyrazinamide resistance in Mycobacterium tuberculosis using structure-based machine learning approaches.

This paper predicts pyrazinamide resistance in Mycobacterium tuberculosis using machine learning models trained on pncA mutations and structural features, achieving 80.2% sensitivity and 76.9% specificity.

Metrics of Coral Microfragment Viability

This study assesses physiological stressors and viability of coral fragments during cryopreservation and their recovery.

Transgene by Germplasm Interactions Can Impact Transgene Evaluation

This study evaluates how genetic background affects transgene performance in maize, finding variable yield impacts across different hybrid combinations.

Methods for Evaluating Effects of Transgenes for Quantitative Traits

This study evaluates three methods for estimating transgene effects across genetic backgrounds and environments, finding that bulked F3 lines topcrossed to a tester inbred provide the most effective approach.

Deciphering Bedaquiline and Clofazimine Resistance in Tuberculosis: An Evolutionary Medicine Approach

This study identifies 230 genomic variants associated with resistance to bedaquiline and clofazimine in tuberculosis using experimental evolution, genome sequencing, and structural modeling.

Speed breeding in growth chambers and glasshouses for crop breeding and model plant research

This paper presents speed breeding protocols for various crops and model plants, detailing conditions and methods to accelerate generation advancement in growth chambers and glasshouses.

Engineered Microbes to Sense and Respond to Enterotoxigenic Escherichia coli

This paper engineers non-pathogenic E. coli to detect ETEC using quorum sensing and cellulose encapsulation for environmental monitoring.