Author

J. Raaijmakers

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

Click to filter author papers

Cancer Biology· 2 Microbiology· 2

Signature Assays, Organisms & Methods

Click to filter · or open tag

Approach:experimental assay· 3 Assay:bulk RNA-seq· 2 Research Focus:differential expression· 2 Organism:human· 2 Approach:statistical model· 2 Organism:Arabidopsis· 1 Organism:bacteria (other)· 1 Research Focus:cancer & tumor microenvironment· 1

Frequent Co-Authors

R. H. Medema· 2 shared A. Dekker· 1 shared A. Friskes· 1 shared A. Iniguez· 1 shared A. Mulero-Sanchez· 1 shared A. van der Meij· 1 shared A. van Oudenaarden· 1 shared A. Vidal· 1 shared

Activity by Year

2017-2023 · peak 3/yr

Co-Author Collaboration Network

10 top collaborators · 29 mutual co-author links

Click any collaborator node to inspect or filter shared papers

Focal author (center)Selected co-authorORCID co-authorUnlinked name

Curved chords = mutual co-authorship

2 shared papersCancer Biology

R. H. Medema

Mutual co-authors in cluster

Author profile →

4 papers

Recent·Most cited

A compendium of Amplification-Related Gain Of Sensitivity (ARGOS) genes in human cancer

V. Rendo, M. Schubert, N. Khuu, M. F. Suarez Peredo Rodriguez, K. Huang, M. Swift, Y. He, J. Zerbib, R. Smith, J. Raaijmakers, P. Bandopadhayay, L. M. Guenther, J. H. Hwang, A. Iniguez, S. Moody, , F. Foijer

The paper identifies ARGOS genes, which are amplified in cancer, have low expression relative to copy number, and are toxic when overexpressed, and validates several as pan-cancer targets.

bioRxiv · Dec 16, 2023 · PreprintCancer Biology

Activity and diversity of prophages harbored by wheat phyllosphere bacteria

P. E. Dougherty, T. K. Nielsen, L. Riber, H. H. Lading, L. M. Forero-Junco, W. Kot, J. Raaijmakers, L. H. Hansen

The paper identifies and quantifies active prophages in wheat-associated bacteria using VIP-Seq, showing their role in bacterial competition and potential impact on microbiome function.

bioRxiv · Apr 4, 2023 · PreprintMicrobiology

Paradoxical activation of oncogenic signaling as a cancer treatment strategy

M. H. Dias, A. Friskes, S. Wang, J. M. H. Fernandes Neto, F. v. Gemert, S. Mourragui, H. J. Kuiken, S. Mainardi, D. Alvarez-Villanueva, C. Lieftink, B. Morris, A. Dekker, E. v. Dijk, C. Papagianni, M. S. da Silva, , R. Bernards

This study shows that inhibiting PP2A and WEE1 together can kill colon cancer cells by causing DNA replication collapse and cell death, and that resistance to this treatment suppresses tumor growth.

bioRxiv · Feb 6, 2023Cancer Biology

Inter- and intracellular colonization of Arabidopsis roots by endophytic actinobacteria and the impact of plant hormones on their antimicrobial activity

A. van der Meij, J. Willemse, M. A. Schneijderberg, R. Geurts, J. Raaijmakers, G. van Wezel

The paper characterizes endophytic actinobacteria in Arabidopsis roots and shows plant hormones affect their antimicrobial activity.

bioRxiv · Nov 21, 2017Microbiology