Author

Judith H.I. Haarhuis

The Netherlands Cancer Institute

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Cell Biology· 1 Genetics· 1 Genomics· 1

Signature Assays, Organisms & Methods

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Approach:experimental assay· 2 Assay:Hi-C· 2 Research Focus:benchmarking· 1 Research Focus:cell signaling & trafficking· 1 Research Focus:chromatin & epigenetic regulation· 1 Research Focus:differential expression· 1 Research Focus:gene regulatory network inference· 1 Approach:genetic perturbation / CRISPR· 1

Frequent Co-Authors

Benjamin D. RowlandiD· 3 shared Elzo de WitiD· 2 shared Hans Teunissen· 2 shared Abdelghani MazouziiD· 1 shared Alessandro BorselliniiD· 1 shared Alessandro VanniniiD· 1 shared Amin AllahyariD· 1 shared Anastassis Perrakis AiD· 1 shared

Activity by Year

2018-2025 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 27 mutual co-author links

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3 shared papersCell Biology

Benjamin D. RowlandORCID

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3 papers

Recent·Most cited

Cell BiologyMolecular CellPeer-reviewedJul 1, 2025

Condensin II activation by M18BP1

Alessandro Borsellini, Duccio Conti, Erin Cutts…·Alessandro Vannini

The paper identifies M18BP1 as a factor required for condensin II localization to chromatin and shows it competes with MCPH1 to activate condensin II during mitosis.

23 citationstop 4%

experimental assaygenetic perturbation / CRISPR

𝕏 PostBluesky

GenomicsNAR Genomics and BioinformaticsPeer-reviewedApr 9, 2021

Hi-C Analyses with GENOVA: a case study with cohesin variants

Robin H. van der Weide, Teun van den Brand, Judith H.I. Haarhuis…·Elzo de Wit

GENOVA is an R-package for analysing Hi-C data, demonstrating that cohesin subunits SA1 and SA2 differentially affect loop formation and genome compartmentalisation.

161 citationstop 1%

humanHi-C

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GeneticsNature GeneticsPeer-reviewedJul 6, 2018

Locus-Specific Enhancer Hubs And Architectural Loop Collisions Uncovered From Single Allele DNA Topologies

Amin Allahyar, Carlo Vermeulen, Britta A. M. Bouwman…·Wouter L. de Laat

The paper introduces a new 3C method, MC-4C, to study multi-way DNA conformations and reveals cooperative and competitive chromatin interactions, including enhancer hubs and loop collisions.

227 citationstop 1%

Hi-Cexperimental assay

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