Author
K. Agarwal
Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.
Biology Disciplines
Click to filter author papersSignature Assays, Organisms & Methods
Click to filter · or open tagActivity by Year
2018-2024 · peak 5/yrCo-Author Collaboration Network
10 top collaborators · 17 mutual co-author links13 papers
Recent·Most cited
Uncertainty Quantification in Acoustic Impedance ofAtlantic Salmon Fish Scale using Scanning AcousticMicroscopy
K. Agarwal, S. Ojha, R. A. Dalmo, T. Seternes, A. Shelke, F. Melandso, A. Habib
The paper develops a framework to estimate stochastic acoustic impedance in Atlantic salmon fish scales using scanning acoustic microscopy and wavelet transforms, achieving over 90% accuracy in PVDF impedance estimation.
bioRxiv · Dec 20, 2023 · PreprintBiophysics
Predicting Early Diabetic Kidney Disease Using a 3D Mesangial Model and Bayesian Mechano-Chemical Stratification
B. Ghosh, F. Niknam, N. Kumar, K. A. Fenton, K. Agarwal
bioRxiv · Dec 10, 2023 · PreprintBiophysics
LysoTracker Deep Red exhibits photoconversion in multi-color structured illumination microscopy
I. S. Opstad, K. B. Larsen, A. B. Birgisdottir, K. Agarwal
The paper reports that LysoTracker Deep Red undergoes photoblueing during multi-color structured illumination microscopy, which can affect spectral separation in cellular assays.
bioRxiv · Oct 29, 2023 · PreprintBiophysics
Spatial mapping of acoustic impedance of shrimp scale using multiple overlap discrete wavelet transform (moDWT)
S. Ojha, K. Agarwal, M. S. A. Khan, A. Shelke, A. Habib
This paper uses moDWT and Gaussian process regression to map acoustic impedance in shrimp scales, achieving over 90% algorithm accuracy.
bioRxiv · Oct 14, 2023 · PreprintBiophysics
Super-resolution histology of paraffin-embedded samples via photonic chip-based microscopy
L. E. Villegas-Hernandez, V. K. Dubey, H. Mao, M. Pradhan, J.-C. Tinguely, D. H. Hansen, S. Acuna, B. Zapotoczny, K. Agarwal, M. Nystad, G. Acharya, K. A. Fenton, H. E. Danielsen, B. S. Ahluwalia
This paper introduces a photonic chip-based microscopy method for super-resolution imaging of FFPE tissue sections, demonstrating improved contrast and compatibility with histological workflows.
bioRxiv · Jun 14, 2023 · PreprintPathology
The complexity of keratocyte migration in salmon explant cultures: initial results and future prospects
I. S. Opstad, D. L. Wolfson, B. S. Ahluwalia, K. Agarwal, T. Seternes, R. A. Dalmo
This study investigates keratocyte migration in Atlantic salmon explant cultures using DIC microscopy, observing complex cell interactions and behaviors during wound healing.
bioRxiv · Jun 1, 2022 · PreprintCell Biology
Prioritising the eradication of invasive species from island archipelagos with high reinvasion risk
V. Kumar, A. Nunez, K. Brown, K. Agarwal, S. Hall, M. Bode
This paper develops a prioritization method for island invasive species eradication that accounts for reinvasion risk, showing it improves conservation outcomes in case studies.
bioRxiv · Nov 4, 2021Ecology
Photonic chip-based multimodal super-resolution microscopy for histopathological assessment of cryopreserved tissue sections
L. E. Villegas-Hernandez, V. K. Dubey, M. Nystad, J.-C. Tinguely, D. A. Coucheron, F. T. Dullo, A. Priyadarshi, S. Acuna, J. M. Mateos, G. Barmettler, U. Ziegler, A.-M. K. Hovd, K. A. Fenton, G. Acharya, K. Agarwal, B. S. Ahluwalia
This study validates a photonic chip-based super-resolution microscopy platform for high-throughput multimodal histopathological analysis of cryopreserved tissue samples.
bioRxiv · May 6, 2021Pathology
Assessment of immunogenicity and protective efficacy of ZyCoV-D DNA vaccine candidates in Rhesus macaques against SARS-CoV-2 infection
P. Yadav, S. Kumar, K. Agarwal, M. Jain, D. Patil, K. Maithal, B. Mathapati, S. Giri, S. Mohandas, A. Shete, G. Sapkal, D. Patil, A. Dey, H. Chandra, G. Deshpande, , P. Abraham
This study evaluates two doses of ZyCoV-D DNA vaccine in rhesus macaques, finding that the 2mg dose via Needle Free Injection System provides better immune response and protection against SARS-CoV-2.
bioRxiv · Feb 2, 2021 · PreprintMicrobiology
Efficient Inhibition of O-glycan biosynthesis using the hexosamine analog Ac5GalNTGc
S.-S. Wang, V. del Solar, X. Yu, A. Antonopoulos, A. E. Friedman, K. Agarwal, M. Garg, S. M. Ahmed, A. Addhya, M. Nasirikenari, J. T. Lau, A. Dell, S. M. Haslam, S.-G. Sampathkumar, S. Neelamegham
This paper demonstrates that Ac5GalNTGc is a potent inhibitor of O-glycan biosynthesis, effectively reducing O-glycan elongation and modulating leukocyte functions.
bioRxiv · Dec 13, 2020Biochemistry
Modelling the effects of leaky predator-exclusion fences and their surrounding halo
The paper models the effects of leaky predator-exclusion fences and their surrounding halo to determine conditions under which the halo effect can provide conservation benefits.
bioRxiv · Aug 16, 2019 · PreprintEcology
Glycan cross-feeding drives mutualism between Fusobacterium and the vaginal microbiota
K. Agarwal, L. Robinson, J. Perry, L. Foster, H. Lin, B. Tortelli, V. P. O Brien, H. Reno, N. Gilbert, W. Lewis, A. Lewis
This study shows that sialidase activity enables Fusobacterium to exploit sialoglycans, promoting its colonization and mutualistic interactions with the vaginal microbiota, which contributes to dysbiosis.
bioRxiv · Nov 6, 2018Microbiology