Author

K. Contrepois

Listed by name: these papers carry no ORCID for this author, so different people with the same name may be mixed together.

Biology Disciplines

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Biochemistry· 1 Immunology· 1 Microbiology· 1

Signature Assays, Organisms & Methods

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Research Focus:differential expression· 2 Research Focus:host-pathogen & immune response· 2 Organism:human· 2 Assay:proteomics· 2 Approach:statistical model· 2 Approach:benchmark study· 1 Assay:bulk RNA-seq· 1 Research Focus:cell signaling & trafficking· 1

Frequent Co-Authors

M. P. Snyder· 2 shared A. Cao· 1 shared A. Celli· 1 shared A. Honkala· 1 shared A. Hsi· 1 shared A. I. Rosenbaum· 1 shared A. J. Sweatt· 1 shared A. W. Brooks· 1 shared

Activity by Year

2021-2024 · peak 1/yr

Co-Author Collaboration Network

10 top collaborators · 20 mutual co-author links

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2 shared papersMicrobiology

M. P. Snyder

Mutual co-authors in cluster

Author profile →

3 papers

Recent·Most cited

Longitudinal profiling of the microbiome at four body sites reveals core stability and individualized dynamics during health and disease

X. Zhou, X. Shen, J. Johnson, D. Spakowicz, M. Agnello, W. Zhou, M. Avina, A. Honkala, F. Chleilat, S. J. Chen, K. Cha, S. Leopold, C. Zhu, L. Chen, L. Lyu, , M. P. Snyder

This study tracks microbiome changes across four body sites in 86 participants over six years, revealing site-specific stability, individualized dynamics, and altered patterns in insulin-resistant individuals.

bioRxiv · Feb 1, 2024Microbiology

Robust and High-Throughput Analytical Flow Proteomics Analysis of Cynomolgus Monkey and Human Matrices with Zeno SWATH Data Independent Acquisition

W. Sun, Y. Lin, Y. Huang, J. Chan, S. Terrillon, A. I. Rosenbaum, K. Contrepois

This paper develops and benchmarks a high-throughput, robust proteomics method using Zeno SWATH DIA for analyzing cynomolgus monkey and human samples, showing improved sensitivity and coverage for metabolic disease studies.

bioRxiv · Nov 30, 2022Biochemistry

Endogenous Retroviral Elements Generate Pathologic Neutrophils and Elastase Rich Exosomes in Pulmonary Arterial Hypertension

S. Taylor, K. Contrepois, B. Benayoun, L. A. Jiang, S. Isobe, L. Wang, S. Melemenidis, M. O. Ozen, S. Otsuki, T. Shinohara, A. J. Sweatt, J. Kaplan, A. Cao, J.-R. Moonen, D. P. Marciano, , M. Rabinovitch

The paper shows that endogenous retroviruses contribute to neutrophil dysfunction and exosome-mediated pulmonary arterial hypertension.

bioRxiv · Jan 8, 2021Immunology